STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
artMArginine transport protein (ABC superfamily, membrane); COG4215. (236 aa)    
Predicted Functional Partners:
artI
Arginine transport protein (ABC superfamily, peri_bind); COG0834; Belongs to the bacterial solute-binding protein 3 family.
 0.995
artQ
Arginine transport protein (ABC superfamily, membrane); COG4160.
 
 
0.978
artP
Arginine transport protein (ABC superfamily, atp_bind); COG4161.
 
 0.976
glnH
High-affinity glutamine transport protein (ABC superfamily, peri_bind); COG0834; Belongs to the bacterial solute-binding protein 3 family.
 
 0.971
gltL
Glutamate-aspartate ABC transporter ATP-binding component; COG1126.
     0.773
glnQ
High-affinity glutamine transport protein (ABC superfamily, atp_bind); COG1126.
     0.759
HDEF_0002
Polar amino acid ABC transporter periplasmic amino acid-binding subunit; Uncertain polar amino acid substrates; COG0834.
 
 0.746
HDEF_0004
Uncertain polar amino acid substrates; COG0765.
 
 
 
0.544
HDEF_0003
Polar amino acid ABC transporter inner membrane subunit; Uncertain polar amino acid substrates; COG0765.
 
 
 
0.541
glnP
High-affinity glutamine transport protein (ABC superfamily, membrane); COG0765.
 
 
 
0.531
Your Current Organism:
Hamiltonella defensa
NCBI taxonomy Id: 572265
Other names: C. Hamiltonella defensa 5AT (Acyrthosiphon pisum), Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), Candidatus Hamiltonella defensa str. 5AT (Acyrthosiphon pisum), Candidatus Hamiltonella defensa strain 5AT (Acyrthosiphon pisum)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.