STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ybiPPutative transmembrane protein (N-terminal); COG2194. (517 aa)    
Predicted Functional Partners:
rtxA_04
Putative RTX-family protein-4; Possible C terminal truncation, paired with HDEF_0622.
  
     0.511
P38_1
APSE-2 prophage; COG0582; Belongs to the 'phage' integrase family.
  
     0.509
HDEF_1458
Phage anti-repressor protein.
  
     0.441
HDEF_2099
Putative sulfatase; COG3083.
  
     0.409
P38_2
APSE-2 prophage; COG0582; Belongs to the 'phage' integrase family.
  
     0.401
Your Current Organism:
Hamiltonella defensa
NCBI taxonomy Id: 572265
Other names: C. Hamiltonella defensa 5AT (Acyrthosiphon pisum), Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), Candidatus Hamiltonella defensa str. 5AT (Acyrthosiphon pisum), Candidatus Hamiltonella defensa strain 5AT (Acyrthosiphon pisum)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.