STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADC60978.1PFAM: Protein of unknown function DUF2006; KEGG: eba:ebA6804 hypothetical protein. (371 aa)    
Predicted Functional Partners:
ADC60979.1
PFAM: protein of unknown function DUF214; KEGG: eba:ebA6805 hypothetical protein.
     0.981
ADC60980.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: eba:ebA6806 ABC transporter, ATP-binding protein.
 
   
 0.894
ADC60977.1
KEGG: rru:Rru_A2527 hypothetical protein.
       0.565
ADC62131.1
PFAM: protein of unknown function DUF214; KEGG: tgr:Tgr7_2114 hypothetical protein.
  
  
 0.559
ADC60976.1
Hypothetical protein; KEGG: AGAP011715-PA; K09680 type II pantothenate kinase.
       0.467
Your Current Organism:
Allochromatium vinosum
NCBI taxonomy Id: 572477
Other names: A. vinosum DSM 180, Allochromatium vinosum DSM 180, Allochromatium vinosum str. DSM 180, Allochromatium vinosum strain DSM 180
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.