STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADC60982.1Membrane protein-like protein; KEGG: tgr:Tgr7_0587 propeptide PepSY amd peptidase M4. (116 aa)    
Predicted Functional Partners:
ADC60984.1
Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: mmb:Mmol_1757 histidine kinase.
 
   
 0.937
ADC60983.1
Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; transcriptional regulator domain protein; KEGG: sbm:Shew185_0239 two component transcriptional regulator.
 
  
 0.861
ADC62419.1
KEGG: mca:MCA2466 hypothetical protein.
  
    0.818
ADC60985.1
PFAM: outer membrane efflux protein; KEGG: tbd:Tbd_1748 putative outer membrane protein.
 
   
 0.800
ADC60996.1
Membrane protein-like protein; KEGG: pde:Pden_1661 peptidase.
  
     0.749
ADC60998.1
Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: mno:Mnod_6193 histidine kinase.
 
   
 0.737
ADC60986.1
TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: tgr:Tgr7_3245 efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
     0.730
ADC60987.1
TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: tgr:Tgr7_3246 heavy metal efflux pump, CzcA family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
     0.653
ADC60988.1
KEGG: tgr:Tgr7_3247 hypothetical protein.
       0.607
ADC60981.1
PFAM: heat shock protein Hsp20; KEGG: asa:ASA_0008 16 kDa heat shock protein A; Belongs to the small heat shock protein (HSP20) family.
       0.508
Your Current Organism:
Allochromatium vinosum
NCBI taxonomy Id: 572477
Other names: A. vinosum DSM 180, Allochromatium vinosum DSM 180, Allochromatium vinosum str. DSM 180, Allochromatium vinosum strain DSM 180
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