STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADC61022.1PFAM: protein of unknown function DUF1631; KEGG: tbd:Tbd_2129 hypothetical protein. (757 aa)    
Predicted Functional Partners:
xseB
Exodeoxyribonuclease VII, small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.
  
 
 0.913
ADC62537.1
TIGRFAM: FimV C-terminal domain; FimV N-terminal domain; KEGG: pmy:Pmen_2718 Tfp pilus assembly protein FimV-like protein.
  
     0.758
ADC61159.1
CheA signal transduction histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; CheW domain protein; Hpt domain protein; SMART: response regulator receiver; CheW domain protein; Hpt domain protein; ATP-binding region ATPase domain protein; KEGG: tgr:Tgr7_2900 putative CheA signal transduction histidine kinase.
 
     0.673
ADC62808.1
PFAM: type IV pilus assembly PilZ; KEGG: pmy:Pmen_1635 type IV pilus assembly PilZ.
  
     0.664
ADC61163.1
PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: aeh:Mlg_0355 response regulator receiver protein.
  
     0.633
ADC63123.1
KEGG: sde:Sde_3365 hypothetical protein.
  
     0.619
ADC62437.1
Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: tgr:Tgr7_2617 histidine kinase.
  
     0.607
ADC64014.1
PFAM: Sporulation domain protein; KEGG: sde:Sde_2696 carbamoyl-phosphate synthase, small subunit.
  
     0.593
ADC63848.1
Putative signal transduction protein; PFAM: Metal-dependent hydrolase HDOD; KEGG: tgr:Tgr7_1323 putative signal transduction protein.
  
    0.581
ADC61161.1
PFAM: CheW domain protein; SMART: CheW domain protein; KEGG: abo:ABO_0107 type IV pili signal transduction protein PilI.
 
     0.576
Your Current Organism:
Allochromatium vinosum
NCBI taxonomy Id: 572477
Other names: A. vinosum DSM 180, Allochromatium vinosum DSM 180, Allochromatium vinosum str. DSM 180, Allochromatium vinosum strain DSM 180
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