STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADC61132.1KEGG: mca:MCA2096 type IV pilus assembly protein PilB; TIGRFAM: type IV-A pilus assembly ATPase PilB; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase. (571 aa)    
Predicted Functional Partners:
ADC61131.1
PFAM: Type II secretion system F domain; KEGG: mca:MCA2095 type IV pilin biogenesis protein PilC.
 
 0.990
ADC61130.1
Prepilin peptidase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
 
 0.965
ADC63915.1
PFAM: Type II secretion system F domain; KEGG: noc:Noc_2894 general secretion pathway protein F.
 
 0.958
ADC63914.1
TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: noc:Noc_2893 general secretion pathway protein G.
 
 
 0.813
coaE
dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
     
 0.726
ADC63958.1
TIGRFAM: type IV pilus secretin PilQ; PFAM: type II and III secretion system protein; NolW domain protein; Secretin/TonB short domain; KEGG: noc:Noc_0251 fimbrial assembly protein PilQ precursor.
 
 
 
 0.712
ADC63954.1
TIGRFAM: type IV pilus assembly protein PilM; KEGG: xac:XAC3385 fimbrial assembly membrane protein.
 
 
 
 0.710
ADC63913.1
KEGG: noc:Noc_2891 general secretion pathway protein H.
  
 
 0.704
ADC62808.1
PFAM: type IV pilus assembly PilZ; KEGG: pmy:Pmen_1635 type IV pilus assembly PilZ.
  
 
 
 0.703
ADC61133.1
PFAM: protein of unknown function DUF88; KEGG: afr:AFE_0663 hypothetical protein.
       0.697
Your Current Organism:
Allochromatium vinosum
NCBI taxonomy Id: 572477
Other names: A. vinosum DSM 180, Allochromatium vinosum DSM 180, Allochromatium vinosum str. DSM 180, Allochromatium vinosum strain DSM 180
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