STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADC61489.1KEGG: sco:SCO4954 hypothetical protein. (192 aa)    
Predicted Functional Partners:
ADC61490.1
PFAM: transposase IS4 family protein; KEGG: nmu:Nmul_A2650 transposase IS4.
       0.693
ADC61491.1
KEGG: nmu:Nmul_A2018 IS298, transposase OrfA.
       0.645
ADC63685.1
PFAM: VWA containing CoxE family protein; SMART: von Willebrand factor type A; KEGG: ecm:EcSMS35_3514 VWA domain-containing protein.
  
     0.570
ADC63683.1
PFAM: ATPase associated with various cellular activities AAA_5; KEGG: ecm:EcSMS35_3512 AAA family ATPase.
  
     0.562
ADC63684.1
KEGG: ecm:EcSMS35_3513 hypothetical protein.
  
     0.507
ADC63682.1
KEGG: ecm:EcSMS35_3511 hypothetical protein.
  
     0.420
ADC63216.1
PFAM: ADP-ribosylation/Crystallin J1; Dual specificity protein phosphatase; KEGG: rsk:RSKD131_4495 hypothetical protein.
 
     0.406
Your Current Organism:
Allochromatium vinosum
NCBI taxonomy Id: 572477
Other names: A. vinosum DSM 180, Allochromatium vinosum DSM 180, Allochromatium vinosum str. DSM 180, Allochromatium vinosum strain DSM 180
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.