STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADC61558.1KEGG: lch:Lcho_0061 thioredoxin-related protein-like protein. (297 aa)    
Predicted Functional Partners:
soxY
SoxY; KEGG: tgr:Tgr7_2221 sulfur oxidation protein SoxY-like protein.
 
   
 0.782
soxB
SoxB; PFAM: 5'-Nucleotidase domain protein; metallophosphoesterase; KEGG: cte:CT1021 sulfur oxidation protein SoxB; Belongs to the 5'-nucleotidase family.
 
     0.779
soxA
SoxA; C-type monoheme cytochrome, which is part of the SoxAX cytochrome complex involved in sulfur oxidation. The SoxAX complex catalyzes the formation of a heterodisulfide bond between the conserved cysteine residue on a sulfur carrier SoxYZ complex subunit SoxY and thiosulfate or other inorganic sulfur substrates. This leads to the intermediary formation of conspicuous sulfur globules inside of the cells.
  
     0.766
soxZ
SoxZ; PFAM: Sulphur oxidation protein SoxZ; KEGG: tgr:Tgr7_2222 sulphur oxidation protein SoxZ.
 
   
 0.765
soxL
Sulfur transferase, periplasm; SMART: Rhodanese domain protein; KEGG: tbd:Tbd_1650 rhodanese-like protein.
  
     0.754
soxX
SoxX; KEGG: vok:COSY_0733 sulfur oxidation protein SoxX.
  
   
 0.735
ADC62598.1
PFAM: protein of unknown function DUF302; KEGG: tbd:Tbd_2564 hypothetical protein.
 
     0.581
ADC61504.1
PFAM: phosphate-selective porin O and P; KEGG: aeh:Mlg_0973 hypothetical protein.
  
     0.576
ADC62078.1
Periplasmic protein-like protein; KEGG: rpe:RPE_2243 hypothetical protein.
  
     0.566
ADC61557.1
TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: tbd:Tbd_0839 HAD family hydrolase.
       0.564
Your Current Organism:
Allochromatium vinosum
NCBI taxonomy Id: 572477
Other names: A. vinosum DSM 180, Allochromatium vinosum DSM 180, Allochromatium vinosum str. DSM 180, Allochromatium vinosum strain DSM 180
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.