STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADC61823.1PFAM: Biopolymer transport protein ExbD/TolR; KEGG: afr:AFE_1486 biopolymer transport protein, ExbD/TolR family. (130 aa)    
Predicted Functional Partners:
ADC61824.1
PFAM: MotA/TolQ/ExbB proton channel; KEGG: acr:Acry_1460 MotA/TolQ/ExbB proton channel.
 
 
 0.983
ADC61822.1
TonB family protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
 
 0.948
tolQ
Protein TolQ; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
 
 0.895
ADC61954.1
PFAM: MotA/TolQ/ExbB proton channel; KEGG: noc:Noc_2673 MotA/TolQ/ExbB proton channel.
 
 
 0.838
ADC63167.1
PFAM: MotA/TolQ/ExbB proton channel; KEGG: mmw:Mmwyl1_4089 MotA/TolQ/ExbB proton channel.
 
 
 0.794
ADC61410.1
PFAM: MotA/TolQ/ExbB proton channel; KEGG: cyt:cce_1738 hypothetical protein.
 
 
 0.727
ADC61309.1
TIGRFAM: TonB family protein; KEGG: hch:HCH_06977 periplasmic protein TonB, links inner and outer membranes.
  
 
 0.714
ADC61897.1
TIGRFAM: protein TolA; TonB family protein; PFAM: Tol-Pal system TolA; KEGG: mca:MCA1228 TolA protein, putative.
  
 
 0.714
ADC61166.1
TIGRFAM: TonB family protein; KEGG: eba:ebA1737 putative TonB protein.
  
 
 0.711
ADC63170.1
TonB family protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
  
 
 0.689
Your Current Organism:
Allochromatium vinosum
NCBI taxonomy Id: 572477
Other names: A. vinosum DSM 180, Allochromatium vinosum DSM 180, Allochromatium vinosum str. DSM 180, Allochromatium vinosum strain DSM 180
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