STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADC61910.1PFAM: ABC-2 type transporter; KEGG: cps:CPS_1067 putative ABC transporter, permease protein. (351 aa)    
Predicted Functional Partners:
ADC61909.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: asa:ASA_1248 ABC-type transporter, ATP-binding protein.
 
  
 0.970
ADC62392.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sml:Smlt1598 putative ABC transporter ATP-binding component.
 
  
 0.857
ADC62391.1
PFAM: secretion protein HlyD family protein; KEGG: smt:Smal_1354 secretion protein HlyD family protein.
 
  
 0.756
ADC62393.1
PFAM: ABC-2 type transporter; KEGG: sml:Smlt1599 putative ABC transport system, transmembrane protein.
  
  
 
0.539
ADC63981.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mca:MCA3078 ABC transporter, ATP-binding protein.
 
  
 0.537
ADC61919.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: noc:Noc_2142 ABC transporter, ATPase subunit.
 
  
 0.521
ADC63307.1
PFAM: Abortive infection protein; KEGG: mca:MCA0527 hypothetical protein.
  
  
 0.516
ADC61908.1
PFAM: type III effector Hrp-dependent outers; KEGG: tgr:Tgr7_2035 type III effector Hrp-dependent outers.
       0.482
ADC62047.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tgr:Tgr7_1859 ABC transporter related.
  
  
 0.446
Your Current Organism:
Allochromatium vinosum
NCBI taxonomy Id: 572477
Other names: A. vinosum DSM 180, Allochromatium vinosum DSM 180, Allochromatium vinosum str. DSM 180, Allochromatium vinosum strain DSM 180
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