STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADC61947.1PFAM: NAD-dependent epimerase/dehydratase; KEGG: cyt:cce_1769 hypothetical protein. (203 aa)    
Predicted Functional Partners:
ADC62464.1
PFAM: permease; KEGG: tcx:Tcr_1870 permease.
   
    0.713
ADC62795.1
SMART: AAA ATPase; KEGG: bpt:Bpet0205 hypothetical protein.
   
    0.713
ADC61629.1
PFAM: protein of unknown function DUF1271; Iron sulphur domain-containing, CDGSH-type; SMART: zinc finger CDGSH-type domain protein; KEGG: mlo:mlr4660 hypothetical protein.
   
    0.642
ADC61960.1
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rpe:RPE_2376 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
    0.624
ADC62083.1
PFAM: CsbD family protein; KEGG: dar:Daro_2060 CsbD-like; Belongs to the UPF0337 (CsbD) family.
   
    0.597
ADC63696.1
Putative transcriptional regulator; PFAM: AAA-4 family protein; KEGG: ajs:Ajs_3604 putative transcriptional regulator.
   
    0.577
ADC61432.1
PFAM: NAD-dependent epimerase/dehydratase; KEGG: ppd:Ppro_0490 NAD-dependent epimerase/dehydratase.
 
   
0.540
ADC61149.1
PFAM: Putative helicase A859L; KEGG: pau:PA14_15600 hypothetical protein.
   
    0.499
ADC61615.1
TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; KEGG: tgr:Tgr7_1218 flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
    
   0.493
ADC63987.1
PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: cyb:CYB_2656 zinc-binding dehydrogenase family oxidoreductase.
 
    0.483
Your Current Organism:
Allochromatium vinosum
NCBI taxonomy Id: 572477
Other names: A. vinosum DSM 180, Allochromatium vinosum DSM 180, Allochromatium vinosum str. DSM 180, Allochromatium vinosum strain DSM 180
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