STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADC61974.1PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: gbm:Gbem_1225 Lysine exporter protein (LYSE/YGGA). (207 aa)    
Predicted Functional Partners:
ADC61975.1
Hypothetical protein.
       0.590
ADC61973.1
Phosphoketolase; PFAM: Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase-like; D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; KEGG: cyn:Cyan7425_2009 phosphoketolase.
       0.532
ADC63374.1
PFAM: CheC domain protein; KEGG: rfr:Rfer_1888 CheC, inhibitor of MCP methylation.
    
   0.493
ADC61984.1
KEGG: ppr:PBPRA1741 hypothetical protein.
    
   0.451
rimO
MiaB-like tRNA modifying enzyme YliG; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.
     
 0.425
ADC62505.1
PFAM: Sporulation domain protein; KEGG: tgr:Tgr7_3032 sporulation domain protein.
  
     0.422
ADC62093.1
KEGG: mfa:Mfla_1690 hypothetical protein.
  
     0.408
Your Current Organism:
Allochromatium vinosum
NCBI taxonomy Id: 572477
Other names: A. vinosum DSM 180, Allochromatium vinosum DSM 180, Allochromatium vinosum str. DSM 180, Allochromatium vinosum strain DSM 180
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.