Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADC62089.1 | ADC62090.1 | Alvin_1150 | Alvin_1151 | KEGG: pla:Plav_1517 hypothetical protein. | KEGG: har:HEAR0765 hypothetical protein. | 0.638 |
ADC62089.1 | ADC62091.1 | Alvin_1150 | Alvin_1152 | KEGG: pla:Plav_1517 hypothetical protein. | PFAM: Uncharacterised conserved protein UCP029693; KEGG: noc:Noc_2137 hypothetical protein. | 0.492 |
ADC62089.1 | ADC62092.1 | Alvin_1150 | Alvin_1153 | KEGG: pla:Plav_1517 hypothetical protein. | KEGG: bte:BTH_II1308 hypothetical protein. | 0.458 |
ADC62089.1 | ADC62093.1 | Alvin_1150 | Alvin_1154 | KEGG: pla:Plav_1517 hypothetical protein. | KEGG: mfa:Mfla_1690 hypothetical protein. | 0.455 |
ADC62090.1 | ADC62089.1 | Alvin_1151 | Alvin_1150 | KEGG: har:HEAR0765 hypothetical protein. | KEGG: pla:Plav_1517 hypothetical protein. | 0.638 |
ADC62090.1 | ADC62091.1 | Alvin_1151 | Alvin_1152 | KEGG: har:HEAR0765 hypothetical protein. | PFAM: Uncharacterised conserved protein UCP029693; KEGG: noc:Noc_2137 hypothetical protein. | 0.592 |
ADC62090.1 | ADC62092.1 | Alvin_1151 | Alvin_1153 | KEGG: har:HEAR0765 hypothetical protein. | KEGG: bte:BTH_II1308 hypothetical protein. | 0.455 |
ADC62090.1 | ADC62093.1 | Alvin_1151 | Alvin_1154 | KEGG: har:HEAR0765 hypothetical protein. | KEGG: mfa:Mfla_1690 hypothetical protein. | 0.415 |
ADC62091.1 | ADC62089.1 | Alvin_1152 | Alvin_1150 | PFAM: Uncharacterised conserved protein UCP029693; KEGG: noc:Noc_2137 hypothetical protein. | KEGG: pla:Plav_1517 hypothetical protein. | 0.492 |
ADC62091.1 | ADC62090.1 | Alvin_1152 | Alvin_1151 | PFAM: Uncharacterised conserved protein UCP029693; KEGG: noc:Noc_2137 hypothetical protein. | KEGG: har:HEAR0765 hypothetical protein. | 0.592 |
ADC62091.1 | ADC62092.1 | Alvin_1152 | Alvin_1153 | PFAM: Uncharacterised conserved protein UCP029693; KEGG: noc:Noc_2137 hypothetical protein. | KEGG: bte:BTH_II1308 hypothetical protein. | 0.581 |
ADC62091.1 | ADC62093.1 | Alvin_1152 | Alvin_1154 | PFAM: Uncharacterised conserved protein UCP029693; KEGG: noc:Noc_2137 hypothetical protein. | KEGG: mfa:Mfla_1690 hypothetical protein. | 0.467 |
ADC62091.1 | ADC63920.1 | Alvin_1152 | Alvin_3020 | PFAM: Uncharacterised conserved protein UCP029693; KEGG: noc:Noc_2137 hypothetical protein. | PFAM: Pyrrolo-quinoline quinone; von Willebrand factor type A; SMART: von Willebrand factor type A; Pyrrolo-quinoline quinone beta-propeller repeat; KEGG: pat:Patl_3171 Tfp pilus assembly protein tip-associated adhesin PilY1-like. | 0.418 |
ADC62091.1 | hflD | Alvin_1152 | Alvin_1514 | PFAM: Uncharacterised conserved protein UCP029693; KEGG: noc:Noc_2137 hypothetical protein. | PFAM: protein of unknown function DUF489; KEGG: mca:MCA0201 hypothetical protein. | 0.484 |
ADC62091.1 | idi | Alvin_1152 | Alvin_2544 | PFAM: Uncharacterised conserved protein UCP029693; KEGG: noc:Noc_2137 hypothetical protein. | Isopentenyl-diphosphate delta-isomerase, type 1; Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP). | 0.427 |
ADC62092.1 | ADC62089.1 | Alvin_1153 | Alvin_1150 | KEGG: bte:BTH_II1308 hypothetical protein. | KEGG: pla:Plav_1517 hypothetical protein. | 0.458 |
ADC62092.1 | ADC62090.1 | Alvin_1153 | Alvin_1151 | KEGG: bte:BTH_II1308 hypothetical protein. | KEGG: har:HEAR0765 hypothetical protein. | 0.455 |
ADC62092.1 | ADC62091.1 | Alvin_1153 | Alvin_1152 | KEGG: bte:BTH_II1308 hypothetical protein. | PFAM: Uncharacterised conserved protein UCP029693; KEGG: noc:Noc_2137 hypothetical protein. | 0.581 |
ADC62092.1 | ADC62093.1 | Alvin_1153 | Alvin_1154 | KEGG: bte:BTH_II1308 hypothetical protein. | KEGG: mfa:Mfla_1690 hypothetical protein. | 0.610 |
ADC62093.1 | ADC62089.1 | Alvin_1154 | Alvin_1150 | KEGG: mfa:Mfla_1690 hypothetical protein. | KEGG: pla:Plav_1517 hypothetical protein. | 0.455 |
page 1 of 2