STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADC62105.1PFAM: Protein of unknown function DUF2254, membrane; KEGG: dba:Dbac_0953 hypothetical protein. (449 aa)    
Predicted Functional Partners:
ADC62104.1
PFAM: Domain of unknown function DUF1840; KEGG: tbd:Tbd_1307 hypothetical protein.
       0.519
ADC63231.1
PFAM: sodium/hydrogen exchanger; KEGG: scl:sce1496 Na+/H+ antiporter.
 
     0.505
ADC61869.1
PFAM: MscS Mechanosensitive ion channel; transport-associated; KEGG: dba:Dbac_1189 MscS mechanosensitive ion channel.
 
     0.486
ADC62106.1
KEGG: hypothetical protein.
       0.458
ADC62108.1
KEGG: rfr:Rfer_2355 MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor; PFAM: CheB methylesterase; MCP methyltransferase CheR-type; PAS fold domain protein; SMART: MCP methyltransferase CheR-type; PAS domain containing protein.
 
     0.450
ADC61877.1
PFAM: CheB methylesterase; KEGG: cph:Cpha266_0793 CheB methylesterase.
  
     0.422
ADC62762.1
KEGG: ttu:TERTU_3358 putative lipoprotein.
  
     0.406
ADC62627.1
PFAM: integrase family protein; KEGG: pde:Pden_3122 phage integrase family protein; Belongs to the 'phage' integrase family.
  
     0.401
Your Current Organism:
Allochromatium vinosum
NCBI taxonomy Id: 572477
Other names: A. vinosum DSM 180, Allochromatium vinosum DSM 180, Allochromatium vinosum str. DSM 180, Allochromatium vinosum strain DSM 180
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