STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
nnrECarbohydrate kinase, YjeF related protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow t [...] (510 aa)    
Predicted Functional Partners:
ADC62159.1
PFAM: protein of unknown function UPF0079; KEGG: shw:Sputw3181_0657 hypothetical protein.
  
 
 0.957
ADC61114.1
TIGRFAM: mutator MutT protein; PFAM: thiamine monophosphate synthase; NUDIX hydrolase; KEGG: noc:Noc_0306 hypothetical protein.
  
 0.933
rppH
NUDIX hydrolase; Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage; Belongs to the Nudix hydrolase family. RppH subfamily.
  
 0.895
ADC61670.1
PFAM: NUDIX hydrolase; KEGG: tgr:Tgr7_2239 dATP pyrophosphohydrolase.
  
 0.895
ADC62847.1
PFAM: NUDIX hydrolase; KEGG: tgr:Tgr7_1047 NUDIX hydrolase.
  
 0.895
ADC62790.1
PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; Soluble ligand binding domain; KEGG: sus:Acid_5018 NADH dehydrogenase (quinone).
   
 
 0.865
ADC62160.1
KEGG: tgr:Tgr7_0894 N-acetylmuramoyl-L-alanine amidase; PFAM: cell wall hydrolase/autolysin; Peptidoglycan-binding lysin domain; SMART: cell wall hydrolase/autolysin; Peptidoglycan-binding LysM.
 
   
 0.864
rhlB
DEAD/DEAH box helicase domain protein; DEAD-box RNA helicase involved in RNA degradation. Has RNA- dependent ATPase activity and unwinds double-stranded RNA. Belongs to the DEAD box helicase family. RhlB subfamily.
   
 0.841
ADC63252.1
PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; KEGG: pae:PA3466 putative ATP-dependent RNA helicase; Belongs to the DEAD box helicase family.
   
 0.841
ADC63676.1
PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; KEGG: cti:RALTA_A0488 ATP-dependent RNA helicase hydrolase; Belongs to the DEAD box helicase family.
   
 0.841
Your Current Organism:
Allochromatium vinosum
NCBI taxonomy Id: 572477
Other names: A. vinosum DSM 180, Allochromatium vinosum DSM 180, Allochromatium vinosum str. DSM 180, Allochromatium vinosum strain DSM 180
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