STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADC62369.1PFAM: Protein of unknown function DUF2061, membrane; KEGG: sse:Ssed_4479 hypothetical protein. (69 aa)    
Predicted Functional Partners:
ADC62370.1
PFAM: Ferritin Dps family protein; KEGG: syp:SYNPCC7002_A0031 Dps family DNA-binding stress response protein; Belongs to the Dps family.
 
     0.738
ADC62367.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: nmu:Nmul_A2332 binding-protein dependent transport system inner membrane protein.
       0.559
ADC62368.1
KEGG: nmu:Nmul_A2331 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
       0.559
ADC62365.1
PFAM: extracellular solute-binding protein family 5; KEGG: noc:Noc_1768 extracellular solute-binding protein.
       0.538
ADC62366.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: noc:Noc_0933 ABC transporter, inner membrane subunit.
       0.538
Your Current Organism:
Allochromatium vinosum
NCBI taxonomy Id: 572477
Other names: A. vinosum DSM 180, Allochromatium vinosum DSM 180, Allochromatium vinosum str. DSM 180, Allochromatium vinosum strain DSM 180
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