STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADC62571.1KEGG: csa:Csal_2465 hypothetical protein. (85 aa)    
Predicted Functional Partners:
ADC62570.1
PFAM: protein of unknown function DUF1566; KEGG: ttu:TERTU_3800 hypothetical protein.
       0.723
ADC62565.1
TIGRFAM: flavoprotein WrbA; PFAM: flavodoxin/nitric oxide synthase; KEGG: psa:PST_2826 trp repressor binding protein; Belongs to the WrbA family.
   
  
 0.716
phaE
poly(R)-hydroxyalkanoic acid synthase, class III, PhaE subunit; Polymerizes D(-)-3-hydroxybutyryl-CoA to create polyhydroxybutyrate (PHB) which consists of thousands of hydroxybutyrate molecules linked end to end. This subunit has no catalytic activity but enhances the activity of PhaC, the catalytic subunit, 100-fold. Belongs to the PHA/PHB synthase family. Type III PhaE subfamily.
  
     0.659
ADC62412.1
PFAM: protein of unknown function DUF349; KEGG: maq:Maqu_2487 hypothetical protein.
  
     0.621
ADC61584.1
PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; KEGG: noc:Noc_0939 peptidoglycan-binding LysM.
   
    0.616
ADC62994.1
PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; KEGG: mca:MCA2842 LysM domain-containing protein.
   
    0.616
ADC61362.1
KEGG: reh:H16_B2153 hypothetical protein.
  
     0.602
ADC61036.1
TIGRFAM: polyhydroxyalkanoate synthesis repressor PhaR; PFAM: PHA accumulation regulator DNA-binding protein; PHB accumulation regulatory domain protein; KEGG: tgr:Tgr7_1516 polyhydroxyalkonate synthesis repressor, PhaR.
 
     0.573
phaC
poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit; Polymerizes D(-)-3-hydroxybutyryl-CoA to create polyhydroxybutyrate (PHB) which consists of thousands of hydroxybutyrate molecules linked end to end. This subunit has catalytic activity that is enhanced 100-fold by PhaE, the non-catalytic subunit.
 
     0.543
parC
DNA topoisomerase IV, A subunit; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 1 subfamily.
  
    0.505
Your Current Organism:
Allochromatium vinosum
NCBI taxonomy Id: 572477
Other names: A. vinosum DSM 180, Allochromatium vinosum DSM 180, Allochromatium vinosum str. DSM 180, Allochromatium vinosum strain DSM 180
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