STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADC62871.1PFAM: TPR repeat-containing protein; KEGG: gsu:GSU2601 TPR domain/SecC motif-containing domain protein. (632 aa)    
Predicted Functional Partners:
ADC62870.1
PFAM: Cephalosporin hydroxylase; KEGG: sme:SM_b21425 hypothetical protein.
 
     0.777
ADC62872.1
PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; KEGG: geo:Geob_0648 TPR repeat-containing protein.
 
    
0.691
ADC62866.1
Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); KEGG: msl:Msil_1841 short-chain dehydrogenase/reductase SDR.
   
   0.657
ADC62868.1
TIGRFAM: methyltransferase FkbM family; KEGG: rec:RHECIAT_PB0000309 nodulation protein.
       0.646
ADC62867.1
PFAM: Radical SAM domain protein; cobalamin B12-binding domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: cma:Cmaq_1100 radical SAM domain-containing protein.
       0.641
ADC62869.1
KEGG: sun:SUN_2139 hypothetical protein.
       0.641
ADC62873.1
Hypothetical protein; KEGG: aha:AHA_3358 signal peptide peptidase SppA, 67K type.
      0.586
ADC62874.1
PFAM: Methyltransferase type 11; Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; SMART: Tetratricopeptide repeat; KEGG: dma:DMR_31080 hypothetical protein.
 
 
0.475
ADC62864.1
PFAM: glycosyl transferase group 1; KEGG: bhy:BHWA1_02679 glycosyl transferase, group 1-like protein.
     
 0.402
Your Current Organism:
Allochromatium vinosum
NCBI taxonomy Id: 572477
Other names: A. vinosum DSM 180, Allochromatium vinosum DSM 180, Allochromatium vinosum str. DSM 180, Allochromatium vinosum strain DSM 180
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