Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ADC62936.1Hypothetical protein; KEGG: gur:Gura_2580 lipopolysaccharide biosynthesis protein. (378 aa)    
Predicted Functional Partners:
ADC62937.1
KEGG: dsa:Desal_2423 capsular exopolysaccharide family.
 
     0.884
ADC62935.1
KEGG: scl:sce8934 hypothetical protein.
     
 0.754
ADC62687.1
PFAM: OmpA/MotB domain protein; SMART: AAA ATPase; KEGG: rpe:RPE_1090 AAA ATPase.
  
     0.703
ADC63132.1
TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; KEGG: hch:HCH_02713 UDP-N-acetyl-D-mannosaminuronate dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
  
 0.638
ADC61820.1
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: nha:Nham_0957 TonB-dependent receptor.
  
   
 0.548
ADC62604.1
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: wsu:WS0993 TonB-dependent receptor.
  
   
 0.517
ADC62727.1
PFAM: polysaccharide biosynthesis protein; KEGG: rfr:Rfer_0691 polysaccharide biosynthesis protein.
 
  
 0.514
ADC61203.1
KEGG: tmz:Tmz1t_1123 UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
  
 0.503
ADC63062.1
KEGG: neu:NE0486 UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
  
 0.503
ADC62856.1
KEGG: mca:MCA0157 hypothetical protein.
  
     0.457
Your Current Organism:
Allochromatium vinosum
NCBI taxonomy Id: 572477
Other names: A. vinosum DSM 180, Allochromatium vinosum DSM 180, Allochromatium vinosum str. DSM 180, Allochromatium vinosum strain DSM 180
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