STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADC63015.1PFAM: Protein of unknown function DUF2189, transmembrane; KEGG: pla:Plav_1524 integral membrane-like protein. (262 aa)    
Predicted Functional Partners:
ADC61731.1
Cytochrome c class I; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
 
     0.612
ADC63016.1
Protein serine/threonine phosphatase; PFAM: Stage II sporulation E family protein; Cache domain protein; histidine kinase HAMP region domain protein; SMART: protein phosphatase 2C domain protein; histidine kinase HAMP region domain protein; KEGG: rpe:RPE_3913 serine phosphatase.
       0.509
ADC63017.1
PFAM: NMT1/THI5 like domain protein; KEGG: glo:Glov_2024 NMT1/THI5 like domain protein.
       0.509
ADC63018.1
PFAM: ATP-binding region ATPase domain protein; KEGG: rpe:RPE_3911 putative anti-sigma regulatory factor, serine/threonine protein kinase.
       0.509
ADC63019.1
Anti-sigma-factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: sat:SYN_02356 anti-sigma F factor antagonist; Belongs to the anti-sigma-factor antagonist family.
       0.509
ADC62261.1
PFAM: Redoxin domain protein; glutaredoxin; KEGG: cyh:Cyan8802_0488 glutaredoxin-family domain protein.
  
     0.462
ADC61729.1
TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; PFAM: cytochrome C oxidase mono-heme subunit/FixO; KEGG: tcx:Tcr_1964 cytochrome c oxidase, cbb3-type, subunit II.
 
     0.436
Your Current Organism:
Allochromatium vinosum
NCBI taxonomy Id: 572477
Other names: A. vinosum DSM 180, Allochromatium vinosum DSM 180, Allochromatium vinosum str. DSM 180, Allochromatium vinosum strain DSM 180
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.