STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADC63184.1PFAM: periplasmic solute binding protein; KEGG: pca:Pcar_3026 ABC-type transport system, periplasmic component. (292 aa)    
Predicted Functional Partners:
ADC62497.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: noc:Noc_2422 ABC transporter, ATPase subunit.
 
 
 0.993
ADC62496.1
PFAM: ABC-3 protein; KEGG: noc:Noc_2421 ABC Mn2+/Zn2+ transporter,inner membrane subunit.
 
 0.990
ADC61501.1
PFAM: ABC-3 protein; KEGG: aeh:Mlg_0970 ABC-3 protein.
  
  
 0.708
ADC63543.1
TIGRFAM: photosynthetic complex assembly protein 2; KEGG: hha:Hhal_1628 hypothetical protein.
  
  
 0.647
rpsN
Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.
  
  
 0.573
fur-3
Ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; KEGG: aeh:Mlg_1905 ferric uptake regulator family protein; Belongs to the Fur family.
 
  
 0.570
rpmB
TIGRFAM: ribosomal protein L28; PFAM: ribosomal protein L28; KEGG: tgr:Tgr7_0325 ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.
  
  
 0.563
ADC63182.1
PFAM: protein of unknown function DUF214; KEGG: pag:PLES_09121 putative permease.
       0.563
ADC63183.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pag:PLES_09131 putative ATP-binding component of ABC transporter.
     
 0.551
ADC63181.1
KEGG: tmz:Tmz1t_3492 hypothetical protein.
       0.500
Your Current Organism:
Allochromatium vinosum
NCBI taxonomy Id: 572477
Other names: A. vinosum DSM 180, Allochromatium vinosum DSM 180, Allochromatium vinosum str. DSM 180, Allochromatium vinosum strain DSM 180
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