STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADC63307.1PFAM: Abortive infection protein; KEGG: mca:MCA0527 hypothetical protein. (298 aa)    
Predicted Functional Partners:
ADC63629.1
KEGG: ace:Acel_0042 OsmC family protein.
  
     0.716
ADC62389.1
KEGG: gur:Gura_0672 hypothetical protein.
  
     0.691
ADC61633.1
KEGG: hypothetical protein.
 
     0.679
ADC63308.1
TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: bav:BAV1578 C4 dicarboxylate tripartite ATP-independent periplasmic (TRAP) transporter, permease component.
       0.675
ADC63309.1
PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: mag:amb2582 TRAP-type mannitol/chloroaromatic compound transport system, small permease component.
       0.675
ADC63312.1
Peptidase U6 penicillin-insensitive murein endopeptidase; Murein endopeptidase that cleaves the D-alanyl-meso-2,6- diamino-pimelyl amide bond that connects peptidoglycan strands. Likely plays a role in the removal of murein from the sacculus.
 
     0.663
ADC62026.1
KEGG: noc:Noc_2348 hypothetical protein.
  
     0.627
ADC61358.1
PFAM: polysaccharide biosynthesis protein; KEGG: mca:MCA1772 polysaccharide biosynthesis protein.
  
    0.617
ADC63311.1
KEGG: rxy:Rxyl_2663 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat-containing protein; response regulator receiver.
     
 0.609
ADC63310.1
KEGG: hha:Hhal_0365 response regulator receiver modulated diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; SMART: GGDEF domain containing protein; response regulator receiver.
       0.594
Your Current Organism:
Allochromatium vinosum
NCBI taxonomy Id: 572477
Other names: A. vinosum DSM 180, Allochromatium vinosum DSM 180, Allochromatium vinosum str. DSM 180, Allochromatium vinosum strain DSM 180
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.