STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADC63480.1TIGRFAM: phytoene desaturase; PFAM: amine oxidase; KEGG: hha:Hhal_1619 phytoene dehydrogenase-related protein. (509 aa)    
Predicted Functional Partners:
ADC63479.1
PFAM: Squalene/phytoene synthase; KEGG: rpe:RPE_1316 squalene/phytoene synthase.
 
 0.999
ADC63477.1
PFAM: hydroxyneurosporene synthase; KEGG: bbt:BBta_6442 hydroxyneurosporene synthase.
 
 
 0.966
ADC63481.1
TIGRFAM: magnesium chelatase accessory protein; PFAM: alpha/beta hydrolase fold; KEGG: rce:RC1_2083 magnesium-chelatase 30 kDa subunit.
 
  
 0.740
ADC62121.1
Magnesium chelatase ATPase subunit I; Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.
  
  
 0.656
ADC62122.1
Magnesium chelatase ATPase subunit D; Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.
 
  
 0.655
ADC63555.1
TIGRFAM: geranylgeranyl reductase; PFAM: FAD dependent oxidoreductase; KEGG: rce:RC1_2080 geranylgeranyl reductase BchP.
 
  
 0.632
ADC63552.1
TIGRFAM: 2-vinyl bacteriochlorophyllide hydratase; PFAM: 2-vinyl bacteriochlorophyllide hydratase; KEGG: rsq:Rsph17025_1011 2-vinyl bacteriochlorophyllide hydratase.
 
  
 0.631
ADC63543.1
TIGRFAM: photosynthetic complex assembly protein 2; KEGG: hha:Hhal_1628 hypothetical protein.
  
  
 0.616
ADC63554.1
TIGRFAM: bacteriochlorophyll/chlorophyll synthetase; PFAM: UbiA prenyltransferase; KEGG: rpc:RPC_1302 bacteriochlorophyll/chlorophyll a synthase.
 
  
 0.615
pufM
Photosynthetic reaction center, M subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis.
 
  
 0.600
Your Current Organism:
Allochromatium vinosum
NCBI taxonomy Id: 572477
Other names: A. vinosum DSM 180, Allochromatium vinosum DSM 180, Allochromatium vinosum str. DSM 180, Allochromatium vinosum strain DSM 180
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