STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADC63505.1KEGG: cvi:CV_1756 hypothetical protein. (144 aa)    
Predicted Functional Partners:
ADC61595.1
TIGRFAM: CRISPR-associated protein Cas2; PFAM: CRISPR-associated protein Cas2; KEGG: gsu:GSU1393 hypothetical protein.
  
 
 0.945
ADC62947.1
KEGG: tbd:Tbd_2777 hypothetical protein.
  
 
 0.922
ihfA
Integration host factor, alpha subunit; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family.
    
   0.680
ADC63504.1
KEGG: dma:DMR_14640 modification methylase.
  
   0.506
ADC63074.1
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: gme:Gmet_2352 oxidoreductase-like.
   
 
 0.502
ADC61603.1
TIGRFAM: CRISPR-associated protein, Cse1 family; PFAM: CRISPR-associated protein Cse1; KEGG: gsu:GSU1385 hypothetical protein.
  
  
 0.491
ADC61600.1
TIGRFAM: CRISPR-associated protein, Cse4 family; PFAM: CRISPR-associated protein CT1975; KEGG: gsu:GSU1387 CRISPR-associated CSE4 family protein.
  
  
 0.476
ihfB
Integration host factor, beta subunit; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family.
    
   0.474
ADC62876.1
PFAM: flagellar protein FlaG protein; KEGG: aeh:Mlg_0702 flagellar protein FlaG protein.
    
   0.451
Your Current Organism:
Allochromatium vinosum
NCBI taxonomy Id: 572477
Other names: A. vinosum DSM 180, Allochromatium vinosum DSM 180, Allochromatium vinosum str. DSM 180, Allochromatium vinosum strain DSM 180
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.