STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADC63543.1TIGRFAM: photosynthetic complex assembly protein 2; KEGG: hha:Hhal_1628 hypothetical protein. (276 aa)    
Predicted Functional Partners:
ADC63545.1
KEGG: rce:RC1_2108 hypothetical protein.
 
    0.936
ADC63544.1
TIGRFAM: photosynthetic complex assembly protein; KEGG: rpc:RPC_1321 photosynthetic complex assembly protein.
 
    0.933
ADC63549.1
KEGG: rce:RC1_2113 magnesium chelatase subunit H; TIGRFAM: magnesium chelatase, H subunit; PFAM: CobN/magnesium chelatase.
 
  
 0.927
ADC63541.1
TIGRFAM: bacteriochlorophyll 4-vinyl reductase; PFAM: 4-vinyl reductase 4VR; KEGG: rce:RC1_0282 bacteriochlorophyll synthase 23 kDa chain.
    0.926
ADC63546.1
TIGRFAM: photosynthetic reaction center H subunit; PFAM: Photosynthetic reaction centre H subunit; PRC-barrel domain protein; KEGG: rpd:RPD_3730 photosynthetic reaction center subunit H.
 
    0.918
ADC63547.1
TIGRFAM: magnesium protoporphyrin O-methyltransferase; PFAM: Magnesium-protoporphyrin IX methyltransferase domain protein; methyltransferase small; KEGG: rce:RC1_2111 Mg-protoporphyrin IX methyl transferase.
 
    0.876
ADC63552.1
TIGRFAM: 2-vinyl bacteriochlorophyllide hydratase; PFAM: 2-vinyl bacteriochlorophyllide hydratase; KEGG: rsq:Rsph17025_1011 2-vinyl bacteriochlorophyllide hydratase.
 
    0.873
ADC63554.1
TIGRFAM: bacteriochlorophyll/chlorophyll synthetase; PFAM: UbiA prenyltransferase; KEGG: rpc:RPC_1302 bacteriochlorophyll/chlorophyll a synthase.
 
    0.858
pufC
Photosynthetic reaction centre cytochrome c subunit; The reaction center of purple bacteria contains a tightly bound cytochrome molecule which re-reduces the photo oxidized primary electron donor.
  
  
 0.857
pufL
Photosynthetic reaction center L subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis.
  
  
 0.857
Your Current Organism:
Allochromatium vinosum
NCBI taxonomy Id: 572477
Other names: A. vinosum DSM 180, Allochromatium vinosum DSM 180, Allochromatium vinosum str. DSM 180, Allochromatium vinosum strain DSM 180
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.