STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADC63683.1PFAM: ATPase associated with various cellular activities AAA_5; KEGG: ecm:EcSMS35_3512 AAA family ATPase. (359 aa)    
Predicted Functional Partners:
ADC63681.1
PFAM: zinc finger SWIM domain protein; KEGG: ecm:EcSMS35_3510 SWIM zinc finger domain-containing protein.
 
     0.951
ADC63682.1
KEGG: ecm:EcSMS35_3511 hypothetical protein.
 
     0.951
ADC63684.1
KEGG: ecm:EcSMS35_3513 hypothetical protein.
 
   
 0.937
ADC63685.1
PFAM: VWA containing CoxE family protein; SMART: von Willebrand factor type A; KEGG: ecm:EcSMS35_3514 VWA domain-containing protein.
 
  
 0.936
ADC61489.1
KEGG: sco:SCO4954 hypothetical protein.
  
     0.562
ADC63680.1
TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase; KEGG: pla:Plav_3121 MazG family protein.
       0.526
uvrA
Excinuclease ABC, A subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.
       0.506
ADC62303.1
PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; KEGG: mca:MCA2754 CbbO protein.
  
  
 0.437
ADC62983.1
PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: tmz:Tmz1t_1590 lysine decarboxylase.
    
 
 0.427
ADC63951.1
PFAM: malic protein NAD-binding; malic protein domain protein; KEGG: tgr:Tgr7_2970 malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)).
  
    0.421
Your Current Organism:
Allochromatium vinosum
NCBI taxonomy Id: 572477
Other names: A. vinosum DSM 180, Allochromatium vinosum DSM 180, Allochromatium vinosum str. DSM 180, Allochromatium vinosum strain DSM 180
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