STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADC63716.1KEGG: app:CAP2UW1_0233 transposase IS4 family protein. (443 aa)    
Predicted Functional Partners:
ADC63717.1
KEGG: syf:Synpcc7942_B2655 hypothetical protein.
       0.526
ADC61633.1
KEGG: hypothetical protein.
  
     0.518
ADC61982.1
PFAM: sulfatase; KEGG: oan:Oant_0275 sulfatase.
  
     0.457
ADC62853.1
KEGG: gur:Gura_3200 hypothetical protein.
  
     0.444
ADC63718.1
Transposase and inactivated derivatives-like protein; KEGG: fre:Franean1_3262 transposase IS4 family protein.
       0.438
ADC63715.1
KEGG: tau:Tola_2435 hypothetical protein.
       0.432
ADC62209.1
PFAM: Hemerythrin HHE cation binding domain protein; KEGG: app:CAP2UW1_2138 hemerythrin HHE cation binding domain protein.
  
     0.418
ADC62838.1
PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; KEGG: hypothetical protein.
  
     0.406
Your Current Organism:
Allochromatium vinosum
NCBI taxonomy Id: 572477
Other names: A. vinosum DSM 180, Allochromatium vinosum DSM 180, Allochromatium vinosum str. DSM 180, Allochromatium vinosum strain DSM 180
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.