STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADC63726.1PFAM: Radical SAM domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: dar:Daro_1996 radical SAM family protein. (703 aa)    
Predicted Functional Partners:
ADC63541.1
TIGRFAM: bacteriochlorophyll 4-vinyl reductase; PFAM: 4-vinyl reductase 4VR; KEGG: rce:RC1_0282 bacteriochlorophyll synthase 23 kDa chain.
  
  
 0.788
ADC63727.1
PFAM: MotA/TolQ/ExbB proton channel; KEGG: noc:Noc_0833 flagellar motor protein PomA.
       0.518
ADC62414.1
PFAM: protein of unknown function DUF465; KEGG: abo:ABO_1235 hypothetical protein.
   
    0.503
ADC62239.1
PFAM: protein of unknown function DUF344; KEGG: gur:Gura_2647 hypothetical protein.
   
    0.499
ADC62253.1
PFAM: protein of unknown function DUF344; KEGG: hha:Hhal_1873 hypothetical protein.
   
    0.499
ADC63725.1
TIGRFAM: alpha-L-glutamate ligase, RimK family; PFAM: RimK domain protein ATP-grasp; GH3 auxin-responsive promoter; KEGG: ttu:TERTU_4395 GH3 auxin-responsive promoter family protein; Belongs to the RimK family.
       0.466
ADC63728.1
PFAM: OmpA/MotB domain protein; KEGG: noc:Noc_0834 flagellar motor protein MotB.
       0.449
ADC63552.1
TIGRFAM: 2-vinyl bacteriochlorophyllide hydratase; PFAM: 2-vinyl bacteriochlorophyllide hydratase; KEGG: rsq:Rsph17025_1011 2-vinyl bacteriochlorophyllide hydratase.
   
  
 0.436
ADC63729.1
PFAM: type IV pilus assembly PilZ; KEGG: pmy:Pmen_1606 type IV pilus assembly PilZ.
       0.433
ADC63724.1
PFAM: major facilitator superfamily MFS_1; KEGG: cyn:Cyan7425_0968 major facilitator superfamily MFS_1.
       0.404
Your Current Organism:
Allochromatium vinosum
NCBI taxonomy Id: 572477
Other names: A. vinosum DSM 180, Allochromatium vinosum DSM 180, Allochromatium vinosum str. DSM 180, Allochromatium vinosum strain DSM 180
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