STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADC63833.1PFAM: Hemolysin-type calcium-binding region; KEGG: cph:Cpha266_2334 lipase, class 3. (1227 aa)    
Predicted Functional Partners:
ADC63834.1
KEGG: cph:Cpha266_2334 lipase, class 3.
 
 0.931
ADC61202.1
TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: avn:Avin_16250 type I secretion membrane fusion protein.
 
  
 0.752
ADC61201.1
Type I secretion system ATPase; KEGG: rce:RC1_0357 proteases secretion ATP-binding protein PrtD; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 
 0.672
ADC61820.1
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: nha:Nham_0957 TonB-dependent receptor.
    
 
 0.640
ADC62604.1
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: wsu:WS0993 TonB-dependent receptor.
    
 
 0.640
ADC62501.1
KEGG: tgr:Tgr7_2962 hypothetical protein.
 
 
 0.566
ADC63837.1
Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.
   
 
 0.558
fliQ
Flagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.
  
    0.528
ADC61794.1
KEGG: noc:Noc_2672 DNA internalization-related competence protein ComEC/Rec2; TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein; SMART: beta-lactamase domain protein.
  
  
 0.513
ADC61673.1
KEGG: pol:Bpro_2469 response regulator receiver/diguanylate phosphodiesterase; TIGRFAM: PAS sensor protein; PFAM: EAL domain protein; PAS fold domain protein; response regulator receiver; GAF domain protein; Hpt domain protein; SMART: EAL domain protein; PAC repeat-containing protein; PAS domain containing protein; response regulator receiver; Hpt domain protein; GAF domain protein.
  
  
 0.473
Your Current Organism:
Allochromatium vinosum
NCBI taxonomy Id: 572477
Other names: A. vinosum DSM 180, Allochromatium vinosum DSM 180, Allochromatium vinosum str. DSM 180, Allochromatium vinosum strain DSM 180
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