STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Vdis_0460InterPro IPR001296; KEGG: tvo:TVN0880 glycosyltransferase; PFAM: glycosyl transferase group 1; SPTR: B5L471 WffI; PFAM: Glycosyl transferases group 1. (143 aa)    
Predicted Functional Partners:
Vdis_0462
InterPro IPR002797; KEGG: kcr:Kcr_0849 polysaccharide biosynthesis protein; PFAM: polysaccharide biosynthesis protein; SPTR: B1L566 Polysaccharide biosynthesis protein; PFAM: Polysaccharide biosynthesis protein.
 
  
 0.819
Vdis_0545
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
  
 0.633
Vdis_0458
Glycosyl transferase family 2; InterPro IPR001173; KEGG: mtp:Mthe_1674 glycosyl transferase family protein; PFAM: glycosyl transferase family 2; SPTR: A0B9R6 Glycosyl transferase, family 2; PFAM: Glycosyl transferase family 2.
  
  
 0.622
Vdis_0463
COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: min:Minf_0497 glycosyltransferase; PFAM: glycosyl transferase family 2; SPTR: B5JPV4 Glycosyl transferase, group 2 family protein; PFAM: Glycosyl transferase family 2.
  
  
 0.614
Vdis_0456
NAD-dependent epimerase/dehydratase; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR016040:IPR001509; KEGG: cma:Cmaq_1446 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: A8M952 NAD-dependent epimerase/dehydratase; PFAM: NAD dependent epimerase/dehydratase family.
  
  
 0.585
Vdis_1534
Glucose-1-phosphate thymidyltransferase; COGs: COG1209 dTDP-glucose pyrophosphorylase; InterPro IPR005835:IPR011004:IPR005908; KEGG: cma:Cmaq_1475 glucose-1-phosphate thymidyltransferase; PFAM: Nucleotidyl transferase; SPTR: A8M980 Glucose-1-phosphate thymidyltransferase; TIGRFAM: glucose-1-phosphate thymidyltransferase; PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate thymidylylransferase, long form.
  
  
 0.583
Vdis_0459
InterPro IPR006342; KEGG: cma:Cmaq_1469 FkbM family methyltransferase; SPTR: A8M974 Methyltransferase FkbM family; TIGRFAM: methyltransferase FkbM family; PFAM: Met-10+ like-protein; TIGRFAM: methyltransferase, FkbM family.
  
  
 0.570
Vdis_1479
Glycosyl transferase group 1; COGs: COG0058 Glucan phosphorylase; InterPro IPR001296; KEGG: tpe:Tpen_1778 glycosyl transferase, group 1; PFAM: glycosyl transferase group 1; SPTR: A1S143 Glycosyl transferase, group 1; PFAM: Carbohydrate phosphorylase.
 
 
 0.560
Vdis_0457
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: sid:M164_0997 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: C4KG90 Glycosyl transferase group 1; PFAM: Glycosyl transferases group 1.
       0.543
Vdis_0461
KEGG: hypothetical protein; SPTR: C0JJ23 Allorecognition 2.
       0.524
Your Current Organism:
Vulcanisaeta distributa
NCBI taxonomy Id: 572478
Other names: V. distributa DSM 14429, Vulcanisaeta distributa DSM 14429, Vulcanisaeta distributa str. DSM 14429, Vulcanisaeta distributa strain DSM 14429
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