STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Vdis_0470Hypothetical protein; KEGG: sul:SYO3AOP1_1399 glycosyl transferase group 1; SPTR: C4FIR5 Glycosyl transferase, group 1 family. (395 aa)    
Predicted Functional Partners:
Vdis_0467
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: hbu:Hbut_1505 glycosyltransferase; PFAM: glycosyl transferase group 1; SPTR: A2BMW6 Predicted glycosyltransferase; PFAM: Glycosyl transferases group 1.
     
 0.787
Vdis_0469
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: ape:APE_2066.1 glycosyl transferase, group 1; PFAM: glycosyl transferase group 1; SPTR: Q9YA73 Glycosyl transferase, group 1; PFAM: Glycosyl transferases group 1.
     
 0.787
Vdis_0468
COGs: COG0726 xylanase/chitin deacetylase; InterPro IPR011330:IPR002509; KEGG: cma:Cmaq_1454 polysaccharide deacetylase; PFAM: polysaccharide deacetylase; SPTR: A8M960 Polysaccharide deacetylase; PFAM: Polysaccharide deacetylase.
       0.778
Vdis_0471
KEGG: mar:MAE_25670 hypothetical protein; SPTR: A8YI05 Similar to tr|Q8Z0N6|Q8Z0N6.
       0.773
Vdis_0545
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
  
 0.633
Vdis_0462
InterPro IPR002797; KEGG: kcr:Kcr_0849 polysaccharide biosynthesis protein; PFAM: polysaccharide biosynthesis protein; SPTR: B1L566 Polysaccharide biosynthesis protein; PFAM: Polysaccharide biosynthesis protein.
  
  
 0.630
Vdis_1534
Glucose-1-phosphate thymidyltransferase; COGs: COG1209 dTDP-glucose pyrophosphorylase; InterPro IPR005835:IPR011004:IPR005908; KEGG: cma:Cmaq_1475 glucose-1-phosphate thymidyltransferase; PFAM: Nucleotidyl transferase; SPTR: A8M980 Glucose-1-phosphate thymidyltransferase; TIGRFAM: glucose-1-phosphate thymidyltransferase; PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate thymidylylransferase, long form.
  
  
 0.583
Vdis_0465
Glycosyl transferase family 2; InterPro IPR001173; KEGG: tna:CTN_0026 hypothetical protein; PFAM: glycosyl transferase family 2; SPTR: B9KB06 Putative uncharacterized protein; PFAM: Glycosyl transferase family 2.
  
  
 0.539
Vdis_1479
Glycosyl transferase group 1; COGs: COG0058 Glucan phosphorylase; InterPro IPR001296; KEGG: tpe:Tpen_1778 glycosyl transferase, group 1; PFAM: glycosyl transferase group 1; SPTR: A1S143 Glycosyl transferase, group 1; PFAM: Carbohydrate phosphorylase.
  
 
 0.521
Vdis_0444
InterPro IPR002797; KEGG: cma:Cmaq_1463 polysaccharide biosynthesis protein; PFAM: polysaccharide biosynthesis protein; SPTR: A8M968 Polysaccharide biosynthesis protein; PFAM: Polysaccharide biosynthesis protein.
  
  
 0.517
Your Current Organism:
Vulcanisaeta distributa
NCBI taxonomy Id: 572478
Other names: V. distributa DSM 14429, Vulcanisaeta distributa DSM 14429, Vulcanisaeta distributa str. DSM 14429, Vulcanisaeta distributa strain DSM 14429
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.