STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Vdis_0519Protein of unknown function DUF1288; InterPro IPR010709; KEGG: cma:Cmaq_0381 hypothetical protein; PFAM: Protein of unknown function DUF1288; SPTR: A8MBD7 Putative uncharacterized protein; PFAM: GINS complex subunit Sld5. (167 aa)    
Predicted Functional Partners:
Vdis_0520
MCM family protein; COGs: COG1241 ATPase involved in replication control Cdc46/Mcm family; InterPro IPR016027:IPR001208:IPR012340; KEGG: cma:Cmaq_0382 MCM family protein; PFAM: MCM family protein; SMART: MCM family protein; SPTR: A8MBD8 MCM family protein; PFAM: MCM2/3/5 family; Belongs to the MCM family.
     
 0.853
Vdis_2059
KEGG: pis:Pisl_0436 hypothetical protein; SPTR: A1RRN2 Putative uncharacterized protein.
   
 
 0.762
Vdis_0521
Hypothetical protein; KEGG: amt:Amet_0659 methyl-accepting chemotaxis sensory transducer; SPTR: Q2L203 Putative bifunctional protein,oxidoreductase/cytochrome subunits.
       0.603
Your Current Organism:
Vulcanisaeta distributa
NCBI taxonomy Id: 572478
Other names: V. distributa DSM 14429, Vulcanisaeta distributa DSM 14429, Vulcanisaeta distributa str. DSM 14429, Vulcanisaeta distributa strain DSM 14429
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.