STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Vdis_0560Transcriptional activator, TenA family; InterPro IPR016084:IPR004305; KEGG: sso:SSO2089 hypothetical protein; PFAM: TENA/THI-4 domain protein; SPTR: P95864 Putative uncharacterized protein; PFAM: TENA/THI-4/PQQC family. (215 aa)    
Predicted Functional Partners:
Vdis_0559
KEGG: cma:Cmaq_1462 hypothetical protein; SPTR: A8M967 Putative uncharacterized protein.
       0.554
Vdis_1408
Extracellular solute-binding protein family 1; COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: siy:YG5714_2774 extracellular solute-binding protein family 1; PFAM: extracellular solute-binding protein family 1; SPTR: C3NBV9 Extracellular solute-binding protein family 1; PFAM: Bacterial extracellular solute-binding protein.
  
     0.495
Vdis_1996
Glycoside hydrolase family 57; COGs: COG1449 Alpha-amylase/alpha-mannosidase; InterPro IPR004300:IPR011330; KEGG: sto:ST1102 hypothetical protein; PFAM: glycoside hydrolase family 57; SPTR: Q972N0 Putative uncharacterized protein ST1102; PFAM: Glycosyl hydrolase family 57; TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type.
  
     0.477
Vdis_0561
KEGG: transcription regulatory protein; K12604 CCR4-NOT transcription complex subunit 1; SPTR: Q5CKT8 Transcription regulatory protein.
       0.476
Vdis_1459
KEGG: cma:Cmaq_1176 hypothetical protein; SPTR: A8MDZ7 Putative uncharacterized protein.
  
     0.475
Vdis_1164
KEGG: cma:Cmaq_1518 hypothetical protein; SPTR: A8M9C3 Putative uncharacterized protein; PFAM: CRISPR-associated protein; TIGRFAM: CRISPR-associated protein, Crm2 family.
  
     0.466
Vdis_2015
COGs: COG2159 metal-dependent hydrolase of the TIM-barrel fold; InterPro IPR006992; KEGG: sis:LS215_0797 amidohydrolase 2; PFAM: amidohydrolase 2; SPTR: C3MN19 Amidohydrolase 2; PFAM: Amidohydrolase.
  
     0.466
Vdis_1158
Poxvirus A32; COGs: COG0433 ATPase; InterPro IPR003593:IPR002789:IPR006758; KEGG: cma:Cmaq_1512 AAA ATPase; PFAM: Poxvirus A32; protein of unknown function DUF87; SMART: AAA ATPase; SPTR: A8M9B7 AAA ATPase; PFAM: Domain of unknown function DUF87; Bacterial protein of unknown function (DUF853).
  
     0.402
Vdis_1545
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: sto:ST1425 hypothetical protein; PFAM: glycosyl transferase group 1; SPTR: Q971C8 Putative uncharacterized protein ST1425; PFAM: Glycosyl transferases group 1.
  
     0.401
Your Current Organism:
Vulcanisaeta distributa
NCBI taxonomy Id: 572478
Other names: V. distributa DSM 14429, Vulcanisaeta distributa DSM 14429, Vulcanisaeta distributa str. DSM 14429, Vulcanisaeta distributa strain DSM 14429
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.