STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Vdis_0874Glycosyl transferase family 2; InterPro IPR001173; KEGG: pas:Pars_0380 glycosyl transferase family protein; PFAM: glycosyl transferase family 2; SPTR: A4WHW5 Glycosyl transferase, family 2; PFAM: Glycosyl transferase family 2. (318 aa)    
Predicted Functional Partners:
Vdis_0872
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: pai:PAE0541 glycosyltransferase (type 1); PFAM: glycosyl transferase group 1; SPTR: Q8ZYZ1 Glycosyltransferase (Type 1); PFAM: Glycosyl transferases group 1.
 
  
 0.860
Vdis_0873
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: pai:PAE0543 glycosyltransferase (type 1); PFAM: glycosyl transferase group 1; SPTR: Q8ZYY9 Glycosyltransferase (Type 1); PFAM: Glycosyl transferases group 1.
 
  
 0.851
Vdis_1791
COGs: COG0515 Serine/threonine protein kinase; InterProIPR017442:IPR008271:IPR000719:IPR020635:IPR 002290:IPR011009; KEGG: cma:Cmaq_1132 protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, subgroup, catalytic domain; SPTR: A8MDV3 Protein kinase; PFAM: Protein kinase domain.
  
 
 0.658
Vdis_0875
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: pai:PAE0540 glycosyltransferase (type 1); PFAM: glycosyl transferase group 1; SPTR: Q8ZYZ2 Glycosyltransferase (Type 1); PFAM: Glycosyl transferases group 1.
  
  
 0.644
Vdis_1728
Glutamine--scyllo-inositol transaminase; COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR000653:IPR015421:IPR015422:IPR015424; KEGG: pai:PAE2053 pleiotropic regulatory protein, conjectural; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; PRIAM: Glutamine--scyllo-inositol transaminase; SPTR: Q8ZVZ3 Pleiotropic regulatory protein, conjectural; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.514
Vdis_0462
InterPro IPR002797; KEGG: kcr:Kcr_0849 polysaccharide biosynthesis protein; PFAM: polysaccharide biosynthesis protein; SPTR: B1L566 Polysaccharide biosynthesis protein; PFAM: Polysaccharide biosynthesis protein.
 
  
 0.498
uppS
Undecaprenyl diphosphate synthase; Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with geranylgeranyl diphosphate (GGPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30E,34E,38E)-undecaprenyl diphosphate (tritrans,heptacis-UPP). It is probably the precursor of glycosyl carrier lipids.
 
 
 0.451
Vdis_2498
NAD-dependent epimerase/dehydratase; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509:IPR016040; KEGG: sso:SSO0809 UDP-glucose 4-epimerase (GalE-2); PFAM: NAD-dependent epimerase/dehydratase; SPTR: Q9UXJ4 UDP-glucose 4-epimerase (GalE-2); PFAM: NAD dependent epimerase/dehydratase family.
 
  
 0.422
queC
exsB protein; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family.
 
  
 0.417
Vdis_0456
NAD-dependent epimerase/dehydratase; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR016040:IPR001509; KEGG: cma:Cmaq_1446 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: A8M952 NAD-dependent epimerase/dehydratase; PFAM: NAD dependent epimerase/dehydratase family.
 
  
 0.415
Your Current Organism:
Vulcanisaeta distributa
NCBI taxonomy Id: 572478
Other names: V. distributa DSM 14429, Vulcanisaeta distributa DSM 14429, Vulcanisaeta distributa str. DSM 14429, Vulcanisaeta distributa strain DSM 14429
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