STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Vdis_1173Major facilitator superfamily MFS_1; COGs: COG2814 Arabinose efflux permease; InterPro IPR011701:IPR016196; KEGG: cma:Cmaq_1609 major facilitator transporter; PFAM: major facilitator superfamily MFS_1; SPTR: A8M9W1 Major facilitator superfamily MFS_1; PFAM: Major Facilitator Superfamily. (424 aa)    
Predicted Functional Partners:
Vdis_1172
KEGG: sto:ST1036 hypothetical protein; SPTR: Q972U8 Putative uncharacterized protein ST1036; PFAM: Protein of unknown function (DUF973).
       0.773
Vdis_0641
InterPro IPR011701:IPR016196; KEGG: cma:Cmaq_1249 major facilitator transporter; PFAM: major facilitator superfamily MFS_1; SPTR: A8ME70 Major facilitator superfamily MFS_1; PFAM: Major Facilitator Superfamily.
  
     0.731
Vdis_2394
InterPro IPR016196:IPR011701; KEGG: cma:Cmaq_1143 major facilitator transporter; PFAM: major facilitator superfamily MFS_1; SPTR: A8MDW4 Major facilitator superfamily MFS_1; PFAM: Major Facilitator Superfamily.
 
     0.670
Vdis_1920
Hypothetical protein; InterPro IPR016196; KEGG: cma:Cmaq_0736 major facilitator transporter; SPTR: A8MCR6 Major facilitator superfamily MFS_1.
  
     0.669
Vdis_1512
KEGG: cma:Cmaq_0860 hypothetical protein; SPTR: A8MD39 Putative uncharacterized protein.
  
     0.608
Vdis_1702
InterPro IPR008985; KEGG: cma:Cmaq_1265 hypothetical protein; SPTR: A8ME86 Putative uncharacterized protein; PFAM: Peptidase A4 family.
  
     0.556
Vdis_1388
KEGG: siy:YG5714_2401 hypothetical protein; SPTR: Q97UB9 Putative uncharacterized protein.
  
     0.470
Your Current Organism:
Vulcanisaeta distributa
NCBI taxonomy Id: 572478
Other names: V. distributa DSM 14429, Vulcanisaeta distributa DSM 14429, Vulcanisaeta distributa str. DSM 14429, Vulcanisaeta distributa strain DSM 14429
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.