STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Vdis_1238Hypothetical protein. (31 aa)    
Predicted Functional Partners:
Vdis_1237
Transcriptional regulator, ArsR family; InterPro IPR001845:IPR011991; KEGG: cma:Cmaq_1369 regulatory protein ArsR; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: A8M8X6 Regulatory protein ArsR; PFAM: Bacterial regulatory protein, arsR family.
       0.527
Vdis_1239
COGs: COG2210 conserved hypothetical protein; KEGG: mse:Msed_1549 hypothetical protein; SPTR: A4YH02 Putative uncharacterized protein.
       0.511
Your Current Organism:
Vulcanisaeta distributa
NCBI taxonomy Id: 572478
Other names: V. distributa DSM 14429, Vulcanisaeta distributa DSM 14429, Vulcanisaeta distributa str. DSM 14429, Vulcanisaeta distributa strain DSM 14429
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.