STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glpKGlycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate. (524 aa)    
Predicted Functional Partners:
Vdis_1499
FAD dependent oxidoreductase; COGs: COG0578 Glycerol-3-phosphate dehydrogenase; InterPro IPR006076:IPR000447; KEGG: cma:Cmaq_1799 FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase; SPTR: A8MAZ1 FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase.
 
 0.984
Vdis_0272
Carbohydrate kinase, FGGY; COGs: COG0554 Glycerol kinase; InterPro IPR018484:IPR018485; KEGG: tpe:Tpen_1373 carbohydrate kinase, FGGY; PFAM: Carbohydrate kinase, FGGY-like; SPTR: A1RZZ0 Carbohydrate kinase, FGGY; PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain.
  
  
 
0.925
psmA
Proteasome endopeptidase complex, alpha subunit; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation.
   
 0.857
psmB
Proteasome endopeptidase complex; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation.
   
 0.857
psmB-2
Proteasome endopeptidase complex; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation.
   
 0.857
Vdis_2285
Peptidase S1 and S6 chymotrypsin/Hap; COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain; InterPro IPR001940:IPR001478:IPR009003:IPR001254; KEGG: cma:Cmaq_0037 peptidase S1 and S6 chymotrypsin/Hap; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; SPTR: A8M9L0 Peptidase S1 and S6 chymotrypsin/Hap; PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF).
   
 0.847
rpl40e
Ribosomal protein L40e; InterPro IPR001876:IPR001975; KEGG: cma:Cmaq_1147 50S ribosomal protein L40e; PFAM: Ribosomal protein L40e; SPTR: A8MDW8 Zinc finger RanBP2-type; PFAM: Zn-finger in Ran binding protein and others; Belongs to the eukaryotic ribosomal protein eL40 family.
    
 0.847
Vdis_1498
COGs: COG0584 Glycerophosphoryl diester phosphodiesterase; InterPro IPR004129:IPR017946; KEGG: cma:Cmaq_0606 glycerophosphodiester phosphodiesterase; PFAM: glycerophosphoryl diester phosphodiesterase; SPTR: A8MCE1 Glycerophosphodiester phosphodiesterase; PFAM: Glycerophosphoryl diester phosphodiesterase family.
  
  
 0.820
Vdis_1845
2-methylcitrate synthase/citrate synthase II; COGs: COG0372 Citrate synthase; InterProIPR011278:IPR016142:IPR002020:IPR019810:IPR 016141; KEGG: cma:Cmaq_0306 2-methylcitrate synthase/citrate synthase II; PFAM: Citrate synthase; SPTR: A8MB64 Citrate synthase; TIGRFAM: 2-methylcitrate synthase/citrate synthase II; PFAM: Citrate synthase; TIGRFAM: 2-methylcitrate synthase/citrate synthase II.
  
  
 0.675
Vdis_0323
TIP49 domain protein; COGs: COG1224 DNA helicase TIP49 TBP-interacting protein; InterPro IPR003959:IPR010339:IPR003593; KEGG: cma:Cmaq_0904 TIP49-like protein; PFAM: TIP49 domain protein; AAA ATPase central domain protein; SMART: AAA ATPase; SPTR: A8MD82 TIP49-like protein; PFAM: TIP49 C-terminus.
   
 0.663
Your Current Organism:
Vulcanisaeta distributa
NCBI taxonomy Id: 572478
Other names: V. distributa DSM 14429, Vulcanisaeta distributa DSM 14429, Vulcanisaeta distributa str. DSM 14429, Vulcanisaeta distributa strain DSM 14429
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