STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Vdis_1663KEGG: bba:Bd1959 hypothetical protein; SPTR: C9ZQA9 Helicase, putative. (87 aa)    
Predicted Functional Partners:
Vdis_1662
Hypothetical protein; InterPro IPR005242; KEGG: mmq:MmarC5_1628 hypothetical protein; SPTR: A4G0E1 Putative uncharacterized protein; PFAM: Uncharacterised protein family (UPF0104); TIGRFAM: conserved hypothetical protein.
       0.655
Vdis_1664
Isochorismatase hydrolase; COGs: COG1335 Amidase related to nicotinamidase; InterPro IPR000868; KEGG: cma:Cmaq_1336 isochorismatase hydrolase; PFAM: isochorismatase hydrolase; SPTR: A8M8U3 Isochorismatase hydrolase; PFAM: Isochorismatase family.
       0.488
Vdis_1665
KEGG: cma:Cmaq_0091 hypothetical protein; SPTR: A8M9R4 Putative uncharacterized protein.
       0.488
Your Current Organism:
Vulcanisaeta distributa
NCBI taxonomy Id: 572478
Other names: V. distributa DSM 14429, Vulcanisaeta distributa DSM 14429, Vulcanisaeta distributa str. DSM 14429, Vulcanisaeta distributa strain DSM 14429
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.