STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Vdis_1782Hypothetical protein; KEGG: sus:Acid_1927 amino acid permease-associated region; SPTR: Q026Z6 Amino acid permease-associated region. (206 aa)    
Predicted Functional Partners:
Vdis_1781
InterPro IPR011701:IPR016196; KEGG: cma:Cmaq_0313 major facilitator transporter; PFAM: major facilitator superfamily MFS_1; SPTR: A8MB71 Major facilitator superfamily MFS_1; PFAM: Major Facilitator Superfamily.
       0.480
kptA
Phosphotransferase KptA/Tpt1; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase.
       0.468
Vdis_1780
Protein of unknown function ATP binding protein; COGs: COG1100 GTPase SAR1 and related small G protein; InterPro IPR004130:IPR003593; KEGG: cma:Cmaq_0368 GTPase; PFAM: protein of unknown function ATP binding; SMART: AAA ATPase; SPTR: A8MBC4 Putative uncharacterized protein; PFAM: Conserved hypothetical ATP binding protein.
       0.403
Your Current Organism:
Vulcanisaeta distributa
NCBI taxonomy Id: 572478
Other names: V. distributa DSM 14429, Vulcanisaeta distributa DSM 14429, Vulcanisaeta distributa str. DSM 14429, Vulcanisaeta distributa strain DSM 14429
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.