STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Vdis_1814KEGG: cma:Cmaq_0141 hypothetical protein; SPTR: A8MA59 Putative uncharacterized protein. (331 aa)    
Predicted Functional Partners:
Vdis_1815
Protein of unknown function DUF373; COGs: COG2237 membrane protein; InterPro IPR007254; KEGG: cma:Cmaq_0614 hypothetical protein; PFAM: Protein of unknown function DUF373; SPTR: A8MCE9 Putative uncharacterized protein; PFAM: Domain of unknown function (DUF373).
       0.836
Vdis_1816
Putative RNA methylase; COGs: COG1041 DNA modification methylase; InterPro IPR000241:IPR002052; KEGG: pas:Pars_1984 putative RNA methylase; PFAM: putative RNA methylase; SPTR: A4WMB4 Putative RNA methylase; PFAM: Putative RNA methylase family UPF0020.
     
 0.821
Vdis_2004
COGs: COG1196 Chromosome segregation ATPase; KEGG: cma:Cmaq_0377 chromosome segregation ATPase-like protein; SPTR: A8MBD3 Chromosome segregation ATPase-like protein.
 
     0.551
Vdis_1813
COGs: COG1053 Succinate dehydrogenase/fumarate reductase flavoprotein subunit; InterProIPR003953:IPR004112:IPR003952:IPR015939:IPR 014006; KEGG: cma:Cmaq_1869 succinate dehydrogenase flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; PRIAM: Succinate dehydrogenase (ubiquinone); SPTR: A8MBF3 Succinate dehydrogenase or fumarate reductase, flavoprotein subunit; TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: domain; FAD binding domain; TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein s [...]
       0.543
Vdis_0398
KEGG: cma:Cmaq_0605 hypothetical protein; SPTR: A8MCE0 Putative uncharacterized protein.
  
     0.504
taw3
Protein of unknown function DUF207; S-adenosyl-L-methionine-dependent methyltransferase that acts as a component of the wyosine derivatives biosynthesis pathway. Probably methylates N-4 position of wybutosine-86 to produce wybutosine-72; Belongs to the TYW3 family.
  
     0.488
Vdis_0346
Haloacid dehalogenase domain protein hydrolase; COGs: COG1011 hydrolase (HAD superfamily); InterPro IPR005834; KEGG: pcl:Pcal_0554 hydrolase; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: A3MTL4 Haloacid dehalogenase domain protein hydrolase.
  
     0.447
Vdis_0851
KEGG: cma:Cmaq_1997 hypothetical protein; SPTR: A8MC28 Putative uncharacterized protein.
  
     0.444
Vdis_1625
Conserved hypothetical protein; COGs: COG0455 ATPase involved in chromosome partitioning; KEGG: cma:Cmaq_0087 hypothetical protein; SPTR: A8M9R0 Putative uncharacterized protein; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.
  
     0.442
Vdis_0876
KEGG: tpe:Tpen_0989 hypothetical protein; SPTR: A1RYV9 Putative uncharacterized protein.
  
     0.427
Your Current Organism:
Vulcanisaeta distributa
NCBI taxonomy Id: 572478
Other names: V. distributa DSM 14429, Vulcanisaeta distributa DSM 14429, Vulcanisaeta distributa str. DSM 14429, Vulcanisaeta distributa strain DSM 14429
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.