node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Vdis_0843 | Vdis_1210 | Vdis_0843 | Vdis_1210 | RNA polymerase Rbp10; InterPro IPR006591; KEGG: pis:Pisl_0899 DNA-directed RNA polymerase subunit P; SMART: RNA polymerase Rbp10; SPTR: A1RSZ3 DNA-directed RNA polymerase, subunit P; manually curated; PFAM: DNA directed RNA polymerase, 7 kDa subunit. | DNA-directed RNA polymerase subunit B; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
Vdis_0843 | Vdis_2353 | Vdis_0843 | Vdis_2353 | RNA polymerase Rbp10; InterPro IPR006591; KEGG: pis:Pisl_0899 DNA-directed RNA polymerase subunit P; SMART: RNA polymerase Rbp10; SPTR: A1RSZ3 DNA-directed RNA polymerase, subunit P; manually curated; PFAM: DNA directed RNA polymerase, 7 kDa subunit. | Helicase c2; COGs: COG1199 Rad3-related DNA helicase; InterPro IPR006555; KEGG: pis:Pisl_0934 helicase C2; SMART: helicase c2; SPTR: A1RT28 Helicase c2; PFAM: DEAD_2. | 0.852 |
Vdis_0843 | Vdis_2388 | Vdis_0843 | Vdis_2388 | RNA polymerase Rbp10; InterPro IPR006591; KEGG: pis:Pisl_0899 DNA-directed RNA polymerase subunit P; SMART: RNA polymerase Rbp10; SPTR: A1RSZ3 DNA-directed RNA polymerase, subunit P; manually curated; PFAM: DNA directed RNA polymerase, 7 kDa subunit. | Helicase domain protein; COGs: COG1061 DNA or RNA helicase of superfamily II; InterProIPR006142:IPR006141:IPR014021:IPR001650:IPR 014001:IPR003587:IPR003586:IPR006935; KEGG: cma:Cmaq_0822 helicase domain-containing protein; PFAM: helicase domain protein; type III restriction protein res subunit; SMART: helicase domain protein; Hedgehog/intein hint domain protein; DEAD-like helicase; SPTR: A8MD01 Helicase domain protein; PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit; TIGRFAM: intein N-terminal splicing region; intein C-terminal splicing region. | 0.946 |
Vdis_0843 | rpoD | Vdis_0843 | Vdis_0085 | RNA polymerase Rbp10; InterPro IPR006591; KEGG: pis:Pisl_0899 DNA-directed RNA polymerase subunit P; SMART: RNA polymerase Rbp10; SPTR: A1RSZ3 DNA-directed RNA polymerase, subunit P; manually curated; PFAM: DNA directed RNA polymerase, 7 kDa subunit. | RNA polymerase insert; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoD/eukaryotic RPB3 RNA polymerase subunit family. | 0.999 |
Vdis_0843 | rpoH | Vdis_0843 | Vdis_1209 | RNA polymerase Rbp10; InterPro IPR006591; KEGG: pis:Pisl_0899 DNA-directed RNA polymerase subunit P; SMART: RNA polymerase Rbp10; SPTR: A1RSZ3 DNA-directed RNA polymerase, subunit P; manually curated; PFAM: DNA directed RNA polymerase, 7 kDa subunit. | RNA polymerase Rpb5; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoH/eukaryotic RPB5 RNA polymerase subunit family. | 0.999 |
Vdis_0843 | rpoK | Vdis_0843 | Vdis_1198 | RNA polymerase Rbp10; InterPro IPR006591; KEGG: pis:Pisl_0899 DNA-directed RNA polymerase subunit P; SMART: RNA polymerase Rbp10; SPTR: A1RSZ3 DNA-directed RNA polymerase, subunit P; manually curated; PFAM: DNA directed RNA polymerase, 7 kDa subunit. | RNA polymerase Rpb6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoK/eukaryotic RPB6 RNA polymerase subunit family. | 0.999 |
Vdis_0843 | rpoN | Vdis_0843 | Vdis_0081 | RNA polymerase Rbp10; InterPro IPR006591; KEGG: pis:Pisl_0899 DNA-directed RNA polymerase subunit P; SMART: RNA polymerase Rbp10; SPTR: A1RSZ3 DNA-directed RNA polymerase, subunit P; manually curated; PFAM: DNA directed RNA polymerase, 7 kDa subunit. | RNA polymerase, N/8 Kd subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoN/eukaryotic RPB10 RNA polymerase subunit family. | 0.999 |
Vdis_0843 | tbp | Vdis_0843 | Vdis_0824 | RNA polymerase Rbp10; InterPro IPR006591; KEGG: pis:Pisl_0899 DNA-directed RNA polymerase subunit P; SMART: RNA polymerase Rbp10; SPTR: A1RSZ3 DNA-directed RNA polymerase, subunit P; manually curated; PFAM: DNA directed RNA polymerase, 7 kDa subunit. | TATA-box binding family protein; General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation. | 0.940 |
Vdis_0843 | tfe | Vdis_0843 | Vdis_0028 | RNA polymerase Rbp10; InterPro IPR006591; KEGG: pis:Pisl_0899 DNA-directed RNA polymerase subunit P; SMART: RNA polymerase Rbp10; SPTR: A1RSZ3 DNA-directed RNA polymerase, subunit P; manually curated; PFAM: DNA directed RNA polymerase, 7 kDa subunit. | Transcription factor TFIIE, alpha subunit; Transcription factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Facilitates transcription initiation by enhancing TATA-box recognition by TATA-box-binding protein (Tbp), and transcription factor B (Tfb) and RNA polymerase recruitment. Not absolutely required for transcription in vitro, but particularly important in cases where Tbp or Tfb function is not optimal. It dynamically alters the nucleic acid-binding properties of RNA polymerases by stabilizing the initiation complex and destabilizing elongatio [...] | 0.956 |
Vdis_1210 | Vdis_0843 | Vdis_1210 | Vdis_0843 | DNA-directed RNA polymerase subunit B; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | RNA polymerase Rbp10; InterPro IPR006591; KEGG: pis:Pisl_0899 DNA-directed RNA polymerase subunit P; SMART: RNA polymerase Rbp10; SPTR: A1RSZ3 DNA-directed RNA polymerase, subunit P; manually curated; PFAM: DNA directed RNA polymerase, 7 kDa subunit. | 0.999 |
Vdis_1210 | Vdis_2353 | Vdis_1210 | Vdis_2353 | DNA-directed RNA polymerase subunit B; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Helicase c2; COGs: COG1199 Rad3-related DNA helicase; InterPro IPR006555; KEGG: pis:Pisl_0934 helicase C2; SMART: helicase c2; SPTR: A1RT28 Helicase c2; PFAM: DEAD_2. | 0.860 |
Vdis_1210 | Vdis_2388 | Vdis_1210 | Vdis_2388 | DNA-directed RNA polymerase subunit B; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Helicase domain protein; COGs: COG1061 DNA or RNA helicase of superfamily II; InterProIPR006142:IPR006141:IPR014021:IPR001650:IPR 014001:IPR003587:IPR003586:IPR006935; KEGG: cma:Cmaq_0822 helicase domain-containing protein; PFAM: helicase domain protein; type III restriction protein res subunit; SMART: helicase domain protein; Hedgehog/intein hint domain protein; DEAD-like helicase; SPTR: A8MD01 Helicase domain protein; PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit; TIGRFAM: intein N-terminal splicing region; intein C-terminal splicing region. | 0.954 |
Vdis_1210 | fen | Vdis_1210 | Vdis_0054 | DNA-directed RNA polymerase subunit B; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Flap structure-specific endonuclease; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. Binds the unpaired 3'-DNA end and kinks the DNA to facilitate 5' cleavage specificity. Cleaves one nucleotide into the double-stranded DNA from the junction in flap DNA, leaving a nick for ligation. Also involved in the base excision repair [...] | 0.716 |
Vdis_1210 | rpoD | Vdis_1210 | Vdis_0085 | DNA-directed RNA polymerase subunit B; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | RNA polymerase insert; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoD/eukaryotic RPB3 RNA polymerase subunit family. | 0.999 |
Vdis_1210 | rpoH | Vdis_1210 | Vdis_1209 | DNA-directed RNA polymerase subunit B; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | RNA polymerase Rpb5; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoH/eukaryotic RPB5 RNA polymerase subunit family. | 0.999 |
Vdis_1210 | rpoK | Vdis_1210 | Vdis_1198 | DNA-directed RNA polymerase subunit B; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | RNA polymerase Rpb6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoK/eukaryotic RPB6 RNA polymerase subunit family. | 0.999 |
Vdis_1210 | rpoN | Vdis_1210 | Vdis_0081 | DNA-directed RNA polymerase subunit B; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | RNA polymerase, N/8 Kd subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoN/eukaryotic RPB10 RNA polymerase subunit family. | 0.999 |
Vdis_1210 | tbp | Vdis_1210 | Vdis_0824 | DNA-directed RNA polymerase subunit B; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | TATA-box binding family protein; General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation. | 0.962 |
Vdis_1210 | tfe | Vdis_1210 | Vdis_0028 | DNA-directed RNA polymerase subunit B; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Transcription factor TFIIE, alpha subunit; Transcription factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Facilitates transcription initiation by enhancing TATA-box recognition by TATA-box-binding protein (Tbp), and transcription factor B (Tfb) and RNA polymerase recruitment. Not absolutely required for transcription in vitro, but particularly important in cases where Tbp or Tfb function is not optimal. It dynamically alters the nucleic acid-binding properties of RNA polymerases by stabilizing the initiation complex and destabilizing elongatio [...] | 0.962 |
Vdis_2353 | Vdis_0843 | Vdis_2353 | Vdis_0843 | Helicase c2; COGs: COG1199 Rad3-related DNA helicase; InterPro IPR006555; KEGG: pis:Pisl_0934 helicase C2; SMART: helicase c2; SPTR: A1RT28 Helicase c2; PFAM: DEAD_2. | RNA polymerase Rbp10; InterPro IPR006591; KEGG: pis:Pisl_0899 DNA-directed RNA polymerase subunit P; SMART: RNA polymerase Rbp10; SPTR: A1RSZ3 DNA-directed RNA polymerase, subunit P; manually curated; PFAM: DNA directed RNA polymerase, 7 kDa subunit. | 0.852 |