STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Vdis_2357ABC nitrate/sulfonate/bicarbonate family transporter, ATPase subunit; COGs: COG4754 conserved hypothetical protein; InterPro IPR018632; KEGG: cma:Cmaq_1634 hypothetical protein; PFAM: ABC nitrate/sulphonate/bicarbonate family transporter, ATPase subunit; SPTR: A8M9Y6 Putative uncharacterized protein; PFAM: ABC nitrate/sulfonate/bicarbonate family transporter, ATPase subunit. (161 aa)    
Predicted Functional Partners:
Vdis_1929
Binding-protein-dependent transport systems inner membrane component; COGs: COG4986 ABC-type anion transport system duplicated permease component; InterPro IPR000515; KEGG: cma:Cmaq_0897 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: A8MD75 Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component.
 
   
 0.851
Vdis_1928
ABC transporter related protein; COGs: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component; InterPro IPR003593:IPR003439:IPR017871; KEGG: cma:Cmaq_0896 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A8MD74 ABC transporter related; manually curated; PFAM: ABC transporter.
 
     0.677
Vdis_2356
KEGG: cma:Cmaq_1000 hypothetical protein; SPTR: A8MDH5 Putative uncharacterized protein.
       0.568
Vdis_0762
Conserved hypothetical protein; COGs: COG1361 S-layer domain; KEGG: sid:M164_2111 hypothetical protein; SPTR: C4KJR9 Putative uncharacterized protein; PFAM: NPCBM-associated, NEW3 domain of alpha-galactosidase.
 
     0.454
Vdis_1623
InterPro IPR001123; KEGG: cma:Cmaq_1138 lysine exporter protein LysE/YggA; PFAM: Lysine exporter protein (LYSE/YGGA); SPTR: A8MDV9 Lysine exporter protein (LYSE/YGGA); PFAM: LysE type translocator.
  
     0.422
Vdis_2409
Antibiotic biosynthesis monooxygenase; COGs: COG2329 Uncharacterized protein involved in biosynthesis of extracellular polysaccharides; InterPro IPR011008:IPR007138; KEGG: sso:SSO11196 hypothetical protein; PFAM: Antibiotic biosynthesis monooxygenase; SPTR: Q3LCI9 Putative small subunit of cytochrome b; PFAM: Antibiotic biosynthesis monooxygenase.
  
     0.413
Your Current Organism:
Vulcanisaeta distributa
NCBI taxonomy Id: 572478
Other names: V. distributa DSM 14429, Vulcanisaeta distributa DSM 14429, Vulcanisaeta distributa str. DSM 14429, Vulcanisaeta distributa strain DSM 14429
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