Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADO76503.1 | ADO76504.1 | Hprae_0347 | Hprae_0348 | KEGG: fpl:Ferp_1643 YYY membrane protein; SPTR: YYY membrane protein. | UvrD/REP helicase; COGs: COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); InterPro IPR014016:IPR014017:IPR000212; KEGG: hut:Huta_1730 UvrD/REP helicase; PFAM: UvrD/REP helicase; SPTR: UvrD/REP helicase; PFAM: UvrD/REP helicase. | 0.668 |
ADO76503.1 | ADO76505.1 | Hprae_0347 | Hprae_0349 | KEGG: fpl:Ferp_1643 YYY membrane protein; SPTR: YYY membrane protein. | Hypothetical protein. | 0.511 |
ADO76504.1 | ADO76503.1 | Hprae_0348 | Hprae_0347 | UvrD/REP helicase; COGs: COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); InterPro IPR014016:IPR014017:IPR000212; KEGG: hut:Huta_1730 UvrD/REP helicase; PFAM: UvrD/REP helicase; SPTR: UvrD/REP helicase; PFAM: UvrD/REP helicase. | KEGG: fpl:Ferp_1643 YYY membrane protein; SPTR: YYY membrane protein. | 0.668 |
ADO76504.1 | ADO76505.1 | Hprae_0348 | Hprae_0349 | UvrD/REP helicase; COGs: COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); InterPro IPR014016:IPR014017:IPR000212; KEGG: hut:Huta_1730 UvrD/REP helicase; PFAM: UvrD/REP helicase; SPTR: UvrD/REP helicase; PFAM: UvrD/REP helicase. | Hypothetical protein. | 0.586 |
ADO76505.1 | ADO76503.1 | Hprae_0349 | Hprae_0347 | Hypothetical protein. | KEGG: fpl:Ferp_1643 YYY membrane protein; SPTR: YYY membrane protein. | 0.511 |
ADO76505.1 | ADO76504.1 | Hprae_0349 | Hprae_0348 | Hypothetical protein. | UvrD/REP helicase; COGs: COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); InterPro IPR014016:IPR014017:IPR000212; KEGG: hut:Huta_1730 UvrD/REP helicase; PFAM: UvrD/REP helicase; SPTR: UvrD/REP helicase; PFAM: UvrD/REP helicase. | 0.586 |
ADO76505.1 | ADO76506.1 | Hprae_0349 | Hprae_0350 | Hypothetical protein. | Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR017475:IPR003362; KEGG: pth:PTH_2563 lipopolysaccharide synthesis sugar transferase; PFAM: sugar transferase; SPTR: Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase subfamily protein; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: Bacterial sugar transferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase. | 0.439 |
ADO76506.1 | ADO76505.1 | Hprae_0350 | Hprae_0349 | Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR017475:IPR003362; KEGG: pth:PTH_2563 lipopolysaccharide synthesis sugar transferase; PFAM: sugar transferase; SPTR: Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase subfamily protein; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: Bacterial sugar transferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase. | Hypothetical protein. | 0.439 |