STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO77146.1Basic membrane lipoprotein; COGs: COG1744 Uncharacterized ABC-type transport system periplasmic component/surface lipoprotein; InterPro IPR003760:IPR017975; KEGG: nth:Nther_0420 basic membrane lipoprotein; PFAM: basic membrane lipoprotein; SPTR: Basic membrane lipoprotein; PFAM: Basic membrane protein. (362 aa)    
Predicted Functional Partners:
ADO77147.1
Nucleoside ABC transporter ATP-binding protein; COGs: COG3845 ABC-type uncharacterized transport systems ATPase components; InterPro IPR003439:IPR003593:IPR017871; KEGG: nth:Nther_0421 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related; PFAM: ABC transporter.
 
 
 0.988
ADO77149.1
Nucleoside ABC transporter membrane protein; COGs: COG1079 ABC-type transport system permease component; InterPro IPR001851; KEGG: nth:Nther_0423 inner-membrane translocator; PFAM: inner-membrane translocator; SPTR: Inner-membrane translocator; PFAM: Branched-chain amino acid transport system / permease component.
 
 
 0.983
ADO77148.1
Inner-membrane translocator; COGs: COG4603 ABC-type uncharacterized transport system permease component; InterPro IPR001851; KEGG: nth:Nther_0422 inner-membrane translocator; PFAM: inner-membrane translocator; SPTR: Inner-membrane translocator; PFAM: Branched-chain amino acid transport system / permease component.
 
 
 0.982
ADO77986.1
Nucleoside ABC transporter ATP-binding protein; COGs: COG3845 ABC-type uncharacterized transport systems ATPase components; InterPro IPR003593:IPR003439:IPR017871; KEGG: aoe:Clos_2379 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related; PFAM: ABC transporter.
 
 
 0.976
ADO77984.1
Inner-membrane translocator; COGs: COG1079 ABC-type transport system permease component; InterPro IPR001851; KEGG: aoe:Clos_2377 inner-membrane translocator; PFAM: inner-membrane translocator; SPTR: Inner-membrane translocator; PFAM: Branched-chain amino acid transport system / permease component.
 
 
 0.966
ADO77985.1
Inner-membrane translocator; COGs: COG4603 ABC-type uncharacterized transport system permease component; InterPro IPR001851; KEGG: aoe:Clos_2378 inner-membrane translocator; PFAM: inner-membrane translocator; SPTR: Inner-membrane translocator; PFAM: Branched-chain amino acid transport system / permease component.
 
 
 0.965
ADO77849.1
Basic membrane lipoprotein; COGs: COG1744 Uncharacterized ABC-type transport system periplasmic component/surface lipoprotein; InterPro IPR003760; KEGG: hor:Hore_00670 basic membrane lipoprotein; PFAM: basic membrane lipoprotein; SPTR: Basic membrane lipoprotein; PFAM: Basic membrane protein.
  
  
 
0.924
ADO77987.1
Basic membrane lipoprotein; COGs: COG1744 Uncharacterized ABC-type transport system periplasmic component/surface lipoprotein; InterPro IPR003760; KEGG: aoe:Clos_2380 basic membrane lipoprotein; PFAM: basic membrane lipoprotein; SPTR: Basic membrane lipoprotein; PFAM: Basic membrane protein.
  
  
 
0.914
ADO77145.1
Transcriptional regulator, GntR family; COGs: COG2188 Transcriptional regulators; InterPro IPR000524:IPR011663; KEGG: hor:Hore_08770 transcriptional regulator, GntR family; PFAM: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; SPTR: Transcriptional regulator, GntR family; PFAM: Bacterial regulatory proteins, gntR family; UTRA domain.
  
    0.548
rbsA
Monosaccharide ABC transporter ATP-binding protein, CUT2 family; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
     0.410
Your Current Organism:
Halanaerobium praevalens
NCBI taxonomy Id: 572479
Other names: H. praevalens DSM 2228, Halanaerobium praevalens ATCC 33744, Halanaerobium praevalens DSM 2228, Halanaerobium praevalens GSL, Halanaerobium praevalens str. DSM 2228, Halanaerobium praevalens strain DSM 2228
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.