STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO77216.1KEGG: hor:Hore_00310 predicted nucleic acid-binding protein, contains PIN domain; SPTR: Predicted nucleic acid-binding protein, contains PIN domain. (134 aa)    
Predicted Functional Partners:
ADO77215.1
KEGG: hor:Hore_00320 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.803
ADO76598.1
KEGG: nth:Nther_2800 putative sensor protein; SPTR: Putative sensor protein; PFAM: Predicted domain in sensory proteins (DUF2308).
  
     0.585
ADO76730.1
KEGG: hor:Hore_16530 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Rod binding protein.
  
     0.419
ADO76462.1
NlpA lipoprotein; COGs: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components; KEGG: hor:Hore_14770 NlpA lipoprotein; SPTR: Predicted protein; PFAM: NMT1/THI5 like.
  
     0.410
ADO78004.1
FlgN family protein; InterPro IPR007809; KEGG: hor:Hore_17150 hypothetical protein; PFAM: FlgN family protein; SPTR: Putative uncharacterized protein; PFAM: FlgN protein.
  
     0.410
Your Current Organism:
Halanaerobium praevalens
NCBI taxonomy Id: 572479
Other names: H. praevalens DSM 2228, Halanaerobium praevalens ATCC 33744, Halanaerobium praevalens DSM 2228, Halanaerobium praevalens GSL, Halanaerobium praevalens str. DSM 2228, Halanaerobium praevalens strain DSM 2228
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.