STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO78198.1Membrane protein of unknown function; COGs: COG1950 membrane protein; InterPro IPR007165; KEGG: mca:MCA3080 hypothetical protein; PFAM: membrane protein of unknown function; SPTR: Putative uncharacterized protein; PFAM: Membrane protein of unknown function. (113 aa)    
Predicted Functional Partners:
ADO77885.1
Phage shock protein C, PspC; COGs: COG1983 Putative stress-responsive transcriptional regulator protein; InterPro IPR007168; KEGG: dsy:DSY4126 hypothetical protein; PFAM: PspC domain protein; SPTR: Putative uncharacterized protein; PFAM: PspC domain.
  
    0.758
ADO78208.1
Phage shock protein C, PspC; COGs: COG1983 Putative stress-responsive transcriptional regulator protein; InterPro IPR007168; KEGG: dhd:Dhaf_2843 phage shock protein C, PspC; PFAM: PspC domain protein; SPTR: Putative uncharacterized protein; PFAM: PspC domain.
  
    0.758
ADO78197.1
KEGG: acl:ACL_1005 hypothetical protein; SPTR: Hypothetical surface-anchored protein.
       0.659
ADO78196.1
InterPro IPR003856; KEGG: hor:Hore_22900 lipopolysaccharide biosynthesis protein; PFAM: lipopolysaccharide biosynthesis protein; SPTR: Lipopolysaccharide biosynthesis protein; PFAM: Chain length determinant protein.
       0.539
ADO78199.1
COGs: COG0031 Cysteine synthase; InterPro IPR005856:IPR005859:IPR001926:IPR001216; KEGG: hor:Hore_23060 cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; SPTR: Cysteine synthase A; TIGRFAM: cysteine synthase A; cysteine synthase; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthase A; cysteine synthases; Belongs to the cysteine synthase/cystathionine beta- synthase family.
       0.454
Your Current Organism:
Halanaerobium praevalens
NCBI taxonomy Id: 572479
Other names: H. praevalens DSM 2228, Halanaerobium praevalens ATCC 33744, Halanaerobium praevalens DSM 2228, Halanaerobium praevalens GSL, Halanaerobium praevalens str. DSM 2228, Halanaerobium praevalens strain DSM 2228
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.