Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADG91898.1COGs: COG1741 Pirin-related protein; InterPro IPR011051:IPR012093:IPR003829; KEGG: abu:Abu_0139 pirin; PFAM: Pirin domain protein; SPTR: A8ER50 Pirin; PFAM: Pirin; Belongs to the pirin family. (234 aa)    
Predicted Functional Partners:
ADG91896.1
Extradiol ring-cleavage dioxygenase class III protein subunit B; COGs: COG3384 conserved hypothetical protein; InterPro IPR004183:IPR014436; KEGG: abu:Abu_0138 LigB family protein; PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; SPTR: A8ER49 Putative uncharacterized protein; PFAM: Catalytic LigB subunit of aromatic ring-opening dioxygenase.
 
  
 0.847
ADG91899.1
NADPH-dependent FMN reductase; COGs: COG0431 flavoprotein; InterPro IPR005025; KEGG: abu:Abu_1537 putative FMN reductase; PFAM: NADPH-dependent FMN reductase; SPTR: A8EV13 Putative FMN reductase; PFAM: NADPH-dependent FMN reductase.
  
    0.788
ADG91897.1
Transcriptional regulator, MarR family; COGs: COG1846 Transcriptional regulators; InterPro IPR011991:IPR000835; KEGG: abu:Abu_0136 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; SPTR: A8ER47 Transcriptional regulator, MarR family; PFAM: MarR family.
     
 0.737
ADG91895.1
Iron sulfur domain-containing, CDGSH-type; InterPro IPR006622:IPR018967:IPR010693; KEGG: mbu:Mbur_2272 hypothetical protein; PFAM: Iron sulphur domain-containing, CDGSH-type; protein of unknown function DUF1271; SMART: zinc finger CDGSH-type domain protein; SPTR: Q12TU4 Zinc finger domain-containing protein; PFAM: Iron-binding zinc finger CDGSH type; Protein of unknown function (DUF1271).
 
     0.651
ADG91900.1
YceI family protein; COGs: COG2353 conserved hypothetical protein; InterPro IPR007372; KEGG: tdn:Suden_2032 YceI; PFAM: YceI family protein; SPTR: Q30NX5 YceI; PFAM: YceI-like domain; Belongs to the UPF0312 family.
     
 0.633
ADG94338.1
Extradiol ring-cleavage dioxygenase class III protein subunit B; COGs: COG3384 conserved hypothetical protein; InterPro IPR014436:IPR004183:IPR006311; KEGG: chu:CHU_3641 hypothetical protein; PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; SPTR: Q11NY9 Putative uncharacterized protein; PFAM: Catalytic LigB subunit of aromatic ring-opening dioxygenase.
 
  
 0.552
ADG93176.1
Luciferase family oxidoreductase, group 1; COGs: COG2141 Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase; InterPro IPR019949:IPR011251:IPR016048; KEGG: spe:Spro_0498 hypothetical protein; PFAM: Luciferase-like, subgroup; SPTR: C9PGQ1 Putative uncharacterized protein; TIGRFAM: luciferase family oxidoreductase, group 1; PFAM: Luciferase-like monooxygenase; TIGRFAM: luciferase family oxidoreductase, group 1.
  
  
 0.425
msrA
Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
 
    0.425
Your Current Organism:
Arcobacter nitrofigilis
NCBI taxonomy Id: 572480
Other names: A. nitrofigilis DSM 7299, Arcobacter nitrofigilis DSM 7299, Arcobacter nitrofigilis str. DSM 7299, Arcobacter nitrofigilis strain DSM 7299
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