STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADG92037.1Hypothetical protein; KEGG: si:dkey-274c14.3; SPTR: Q5EG54 Vitellogenin. (54 aa)    
Predicted Functional Partners:
ADG92032.1
COGs: COG1858 Cytochrome c peroxidase; InterPro IPR009056:IPR011031:IPR004852; KEGG: abu:Abu_1742 diheme cytochrome c peroxidase; PFAM: Di-haem cytochrome c peroxidase; PRIAM: Cytochrome-c peroxidase; SPTR: A8EVL6 Diheme cytochrome c peroxidase; PFAM: Di-haem cytochrome c peroxidase.
       0.709
ADG92033.1
Fatty acid hydroxylase; COGs: COG3000 Sterol desaturase; InterPro IPR006694; KEGG: abu:Abu_1743 sterol desaturase-related protein; PFAM: fatty acid hydroxylase; SPTR: A8EVL7 Sterol desaturase-related protein; PFAM: Fatty acid hydroxylase superfamily.
       0.709
ADG92034.1
KEGG: abu:Abu_1744 hypothetical protein; SPTR: A8EVL8 Putative uncharacterized protein; PFAM: Imelysin.
       0.709
ADG92035.1
Protein of unknown function DUF1111; COGs: COG3488 thiol oxidoreductase; InterPro IPR009056:IPR010538; KEGG: abu:Abu_1745 hypothetical protein; PFAM: protein of unknown function DUF1111; SPTR: A8EVL9 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1111).
       0.709
ADG92036.1
Peptidase M75, Imelysin; COGs: COG3487 Uncharacterized iron-regulated protein; InterPro IPR018976; KEGG: abu:Abu_1746 hypothetical protein; PFAM: Peptidase M75, Imelysin; SPTR: A8EVM0 Putative uncharacterized protein; PFAM: Imelysin.
       0.709
ADG92038.1
COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: abu:Abu_0706 hypothetical protein; PFAM: outer membrane efflux protein; SPTR: A8ESP7 Conserved hypothetical membrane protein; PFAM: Outer membrane efflux protein.
       0.481
ADG92039.1
Efflux transporter, RND family, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: abu:Abu_0707 HlyD family secretion protein; PFAM: secretion protein HlyD family protein; SPTR: A8ESP8 HlyD family secretion protein; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
       0.481
ADG92040.1
ABC transporter related protein; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439:IPR017871:IPR003593; KEGG: abu:Abu_0708 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A8ESP9 ABC transporter, ATP-binding protein; PFAM: ABC transporter.
       0.481
ADG92041.1
Protein of unknown function DUF214; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR000630:IPR003838; KEGG: abu:Abu_0709 ABC transporter, permease protein; PFAM: protein of unknown function DUF214; SPTR: A8ESQ0 ABC transporter, permease protein; PFAM: Predicted permease.
       0.481
Your Current Organism:
Arcobacter nitrofigilis
NCBI taxonomy Id: 572480
Other names: A. nitrofigilis DSM 7299, Arcobacter nitrofigilis DSM 7299, Arcobacter nitrofigilis str. DSM 7299, Arcobacter nitrofigilis strain DSM 7299
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.