Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADG92130.1KEGG: abu:Abu_2074 hypothetical protein; SPTR: A8EWG8 Putative uncharacterized protein; PFAM: FixH. (186 aa)    
Predicted Functional Partners:
ADG92131.1
Conserved hypothetical protein; COGs: COG3893 Inactivated superfamily I helicase; InterPro IPR011604; KEGG: abu:Abu_2073 hypothetical protein; SPTR: A8EWG7 Putative uncharacterized protein.
     
 0.836
ADG92129.1
KEGG: abu:Abu_2075 hypothetical protein; SPTR: A8EWG9 Putative uncharacterized protein.
     
 0.835
ADG92123.1
COGs: COG3278 Cbb3-type cytochrome oxidase subunit 1; InterPro IPR000883:IPR004677; KEGG: abu:Abu_2081 cytochrome c oxidase, cbb3-type, subunit I; PFAM: cytochrome c oxidase subunit I; PRIAM: Cytochrome-c oxidase; SPTR: A8EWH5 Cytochrome c oxidase, cbb3-type, subunit I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I; PFAM: Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I; Belongs to the heme-copper respiratory oxidase family.
  
 
 0.827
ADG92124.1
COGs: COG2993 Cbb3-type cytochrome oxidase cytochrome c subunit; InterPro IPR009056:IPR003468; KEGG: abu:Abu_2080 cytochrome c oxidase, cbb3-type, subunit II; PFAM: cytochrome C oxidase mono-heme subunit/FixO; SPTR: A8EWH4 Cytochrome c oxidase, cbb3-type, subunit II; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; PFAM: Cytochrome C oxidase, mono-heme subunit/FixO; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II.
  
 
 0.810
ADG92125.1
InterPro IPR014107; KEGG: abu:Abu_2079 cytochrome c oxidase, cbb3-type, subunit IV; PFAM: Cytochrome c oxidase cbb3-type CcoQ; SPTR: A8EWH3 Cytochrome c oxidase, cbb3-type, subunit IV; PFAM: Cbb3-type cytochrome oxidase component FixQ; TIGRFAM: cytochrome c oxidase, cbb3-type, CcoQ subunit, epsilon-Proteobacterial.
  
  
 0.740
ADG92126.1
Cytochrome c class I; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
  
 
 0.725
ADG94693.1
COGs: COG3278 Cbb3-type cytochrome oxidase subunit 1; InterPro IPR004677:IPR000883; KEGG: abu:Abu_2081 cytochrome c oxidase, cbb3-type, subunit I; PFAM: cytochrome c oxidase subunit I; PRIAM: Cytochrome-c oxidase; SPTR: A8EWH5 Cytochrome c oxidase, cbb3-type, subunit I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I; PFAM: Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I; Belongs to the heme-copper respiratory oxidase family.
  
 
 0.677
ADG92127.1
KEGG: abu:Abu_2077 hypothetical protein; SPTR: A8EWH1 Putative uncharacterized protein.
     
 0.652
ADG94694.1
COGs: COG2993 Cbb3-type cytochrome oxidase cytochrome c subunit; InterPro IPR003468:IPR009056; KEGG: abu:Abu_2080 cytochrome c oxidase, cbb3-type, subunit II; PFAM: cytochrome C oxidase mono-heme subunit/FixO; SPTR: A8EWH4 Cytochrome c oxidase, cbb3-type, subunit II; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; PFAM: Cytochrome C oxidase, mono-heme subunit/FixO; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II.
  
 
 0.625
ADG94770.1
KEGG: abu:Abu_0439 hypothetical protein; SPTR: A8ERZ0 Putative uncharacterized protein.
  
 
 0.622
Your Current Organism:
Arcobacter nitrofigilis
NCBI taxonomy Id: 572480
Other names: A. nitrofigilis DSM 7299, Arcobacter nitrofigilis DSM 7299, Arcobacter nitrofigilis str. DSM 7299, Arcobacter nitrofigilis strain DSM 7299
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