STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADG92190.1SNARE associated Golgi protein-related protein; COGs: COG0586 membrane-associated protein; InterPro IPR015414; KEGG: abu:Abu_2024 hypothetical protein; PFAM: SNARE associated Golgi protein; SPTR: A8EWB8 Conserved hypothetical integral membrane protein; PFAM: SNARE associated Golgi protein. (202 aa)    
Predicted Functional Partners:
ADG92188.1
ABC transporter related protein; COGs: COG1121 ABC-type Mn/Zn transport systems ATPase component; InterPro IPR003439:IPR017871:IPR003593; KEGG: sun:SUN_1062 Mn2+/Zn2+ ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A6Q960 Mn2+/Zn2+ ABC transporter, ATP-binding protein; PFAM: ABC transporter.
       0.777
ADG92189.1
ABC-3 protein; COGs: COG1108 ABC-type Mn2+/Zn2+ transport systems permease components; InterPro IPR001626; KEGG: sun:SUN_1061 Mn2+/Zn2+ ABC transporter, permease; PFAM: ABC-3 protein; SPTR: A6Q959 Mn2+/Zn2+ ABC transporter, permease; PFAM: ABC 3 transport family.
       0.776
ADG92191.1
Short-chain dehydrogenase/reductase SDR; COGs: COG0300 Short-chain dehydrogenase of various substrate specificities; InterPro IPR002347:IPR002198:IPR016040; KEGG: cha:CHAB381_0075 3-oxoacyl-[acyl-carrier protein] reductase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: C2A0R5 Putative uncharacterized protein; PFAM: short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.773
ADG92192.1
Magnesium transporter; Acts as a magnesium transporter.
       0.773
ADG92955.1
Conserved hypothetical protein; COGs: COG0586 membrane-associated protein; KEGG: abu:Abu_1544 hypothetical protein; SPTR: A8EV20 Conserved hypothetical integral membrane protein; PFAM: SNARE associated Golgi protein.
  
     0.556
ADG92185.1
KEGG: cha:CHAB381_0073 hypothetical protein; SPTR: C2A0R0 Putative uncharacterized protein; PFAM: Phosphorylase superfamily.
       0.514
ADG92187.1
Patatin; COGs: COG1752 esterase of the alpha-beta hydrolase superfamily; InterPro IPR016035:IPR002641; KEGG: pmx:PERMA_0980 patatin; PFAM: Patatin; SPTR: A3HRX0 Putative uncharacterized protein; PFAM: Patatin-like phospholipase.
     
 0.508
ADG92186.1
Conserved hypothetical protein; COGs: COG1533 DNA repair photolyase; KEGG: cha:CHAB381_0074 hypothetical protein; SPTR: B6BLV9 Putative uncharacterized protein.
       0.506
rplS
Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.
       0.431
trmD
tRNA (guanine-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.
  
    0.403
Your Current Organism:
Arcobacter nitrofigilis
NCBI taxonomy Id: 572480
Other names: A. nitrofigilis DSM 7299, Arcobacter nitrofigilis DSM 7299, Arcobacter nitrofigilis str. DSM 7299, Arcobacter nitrofigilis strain DSM 7299
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